| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1135 |
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| Symbol | |
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| ID | 8252229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1331281 |
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| End bp | 1332246 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934786 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_003091415 |
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| Protein GI | 255531043 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.930021 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTCT TTTCTGGATA TGCTGACTTG CGGGAGTATA CCATTAAAGG TTATGCCCAG
GGAACTGACT ATACGGTTAA ATATTTTGCA GCAGACAGCA TTGTTACGAA AGCGGATATT
GACCGTATTT TGAATGCTAT AGATTCCTCT ATGTCACTTT ATAAACCTTA TTCTTTAATA
TGCAGGTTTA ATGCAGCTGA TGAGGGTTTG CATCTGGACC AGCACCTTGT GAAGGTGATG
CGCAAGTCAT TTGCCGTTTA CAAAGATACC CGGGGGAAAT TTGATGCCAC CGTTGAGCCG
TTGGTACAGG CCTGGGGATT TGGTGCCAAG CCCATCATTA AATTCCCTGA TAGTGCGGAA
GTTAAAATGC TGTTAGCTTG TGTGGGTATG AATAACCTGA GTTTAAAAGG AGATTATCTT
AAAAAAAGCA GGCCTTGTAT AAAACTGGAC CTGAACGGGA TTGCACAGGG CTATAGTGTA
GATGTTATTG CCGATTATCT GCAACAAAAA AAAATAAAGT CCTTTGTTGT GGAATTAGGA
GGAGAACTTA GAATGAAAGG ACCTAAGCCT GACGGAAGCT CGCTACGTAT TGGTATTGAA
GGCCCCGCAA TGACTGCGGA TGCTGAACCT GTGATCAAAC ATGTCGTCCG TATTAATAAT
GGCGCAATAA CAACTGCAGG AAATTATAGA AAATACCTGC TAAACGGGGC AAAAAAAATT
GCACACCTTA TTGATCCTAA AACGGGCTAT CCTTTAGACA ATGCATTGAT CAGCGTAACG
ATTTATGCAA AGGACGCCAT TACTGCCGAT GGTTATGATA GTCCGATTAT GGCAATGGGC
GTTAAAGAAG CCCTGGATTT TGTCAAAGCA AGGAAGGGAA TGGAAGCTTA CATTATTTAT
CACAAGAAAG ATGGTAGTGT GGCCGACACA CTGACCAGTG GTTTCAGGAA AATGCTGGTA
GACTAA
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| Protein sequence | MNFFSGYADL REYTIKGYAQ GTDYTVKYFA ADSIVTKADI DRILNAIDSS MSLYKPYSLI
CRFNAADEGL HLDQHLVKVM RKSFAVYKDT RGKFDATVEP LVQAWGFGAK PIIKFPDSAE
VKMLLACVGM NNLSLKGDYL KKSRPCIKLD LNGIAQGYSV DVIADYLQQK KIKSFVVELG
GELRMKGPKP DGSSLRIGIE GPAMTADAEP VIKHVVRINN GAITTAGNYR KYLLNGAKKI
AHLIDPKTGY PLDNALISVT IYAKDAITAD GYDSPIMAMG VKEALDFVKA RKGMEAYIIY
HKKDGSVADT LTSGFRKMLV D
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