| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1130 |
|---|
| Symbol | |
|---|
| ID | 8252224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1322273 |
|---|
| End bp | 1322995 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 644934781 |
|---|
| Product | protein of unknown function DUF1080 |
|---|
| Protein accession | YP_003091410 |
|---|
| Protein GI | 255531038 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.342121 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAATA AAATCAGCTT CCTTGTAATT GTTTTAAACA TAACAGGAAC TATTGTGTAT
GGAACACCTA AACCACCAAT TAAGAAATCG GTACAAGCAA AAACCAGTTG GATAAGTTTG
TTTGATGGGC AAAGTTTAAA AGGCTGGCAT ATTTTTAATA AAACCGGACA AATTGAAAAC
TGGACAGTTG AAGATGGCGC AATGGTGTGT CATGGGTTTA AAGGCCCAAG TGGTGCTGGT
GATATTGTGT CGGACCTTAA ATTTGAAAAC TTTGAACTGA GCTGGGAATG GAAGGTAGAT
AAAGGAAGTA ACAGTGGTGT TTTTTACCAT ATTTTAGAAG GACCAAAATA CCATAGAGCT
TCTGAAACCG CACCGGAATA TCAGATCATT GATGATGCCG GGTTTCCTGC AAAACTGGAA
GAATGGCAAA AAACAGGTGC AGATTATGCA ATGAATGTAC CTAACGACAA AAAGAAGTTA
CAACCGACGG GAACCTGGAA TACAAGCAAA ATCATCTTTA ATAAGGGCCA TGTAGAGCAT
TGGCTAAACG GAAAGAAGAT TGTTGAGTTT AATGCCTGGA CTGAAGAATG GAATAGACAA
AAGAAAGAAG GAAAGTGGAA GGATTATCCT GATTACGGAA TTGCTAAAGC CGGATCTGTT
GGTTTTCAGG ATCATGGGAA CAAGGCCTAT TTTAAAAATA TAAAGATCAG GGAAATAAAA
TAA
|
|---|
| Protein sequence | MANKISFLVI VLNITGTIVY GTPKPPIKKS VQAKTSWISL FDGQSLKGWH IFNKTGQIEN
WTVEDGAMVC HGFKGPSGAG DIVSDLKFEN FELSWEWKVD KGSNSGVFYH ILEGPKYHRA
SETAPEYQII DDAGFPAKLE EWQKTGADYA MNVPNDKKKL QPTGTWNTSK IIFNKGHVEH
WLNGKKIVEF NAWTEEWNRQ KKEGKWKDYP DYGIAKAGSV GFQDHGNKAY FKNIKIREIK
|
|---|
| |