| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1129 |
|---|
| Symbol | |
|---|
| ID | 8252223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1321237 |
|---|
| End bp | 1322217 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644934780 |
|---|
| Product | amidohydrolase 2 |
|---|
| Protein accession | YP_003091409 |
|---|
| Protein GI | 255531037 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2159] Predicted metal-dependent hydrolase of the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.268547 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA ATAAATCTAC TTGTGAGAAA GGTCTTACTT CTTTTTCACG CCGCAATTTT
TTAATAGGAT CGGGCTTGCT TTTTGCAGGC TCGGTTTTAA AGGTTAATGG TGCAGGATTA
CTGGATGACC CTGAACCCAT CATTGACATC CATCAGCATA CTGATTTCAG CGGGCGTACT
CAGGAGCAGT TAATTGCACA TCAAAGAAAG ATGGGCATAA CTACAACTGT ACTTTTGCCT
GCGGGGAGAC CTTTAAATTA TGGTTCTACC TATTACGGGG TTGCCAACGG TCTGCAGGTA
AAAGCTACCG GAAATGAAGT TTGCTATAAA CTGGCGCAGC AATATCCAAA AGAATACAGG
TTTGGGGCAA ATGAGGTACC GGATTTCCCT GGTGCTATTC AGGAAATTGA GAAATATCTG
AAATTAGGCG CTCCGGTGAT CGGTGAATTG AAATTTGGGG TTGAATGTGA TTCACCGGGA
ATGCAAAAGA TTTATCAGCT TGCCCAGGCT TACGATGTTC CTGTGCTGAT GCACTGGCAA
TACAATATGT TTAACAGAGG ATTTGAACGC TTCTACAAAA TGCTGGAAAA ATATCCTAAG
GTAAATTTTC TTGCACACTC ACAAACTTGG TGGGCAAATA TTGGAAAAGA ACATAAAGAC
GAAAATGTCC TTTATCCAAA AGGTAAAGTA GTTGCAGGAG GGCTAACTGA TCAGTTATTG
AGAAATTATT CAAATGTATA CGGTGATCTT TCCGGTTTCT CTGGTCTGTA TGCAATGACG
CGGGATGAAG ACCATGCACG TGGATTTTTA GAAAGGCATC AGGACAAGCT GCTCTATGGC
AGTGATTGTT CGGATATATT TGGTAGTGGA GAAGGATGTA CAGGCGCCCA GGCCATTGCT
GCTATCCGGA GGTTTTCAGC AACAAAGGAG ATAGAAAGGA AAATACTATT TAGCAATGCT
AAAAAATTAT TGCGATTGTA A
|
|---|
| Protein sequence | MKNNKSTCEK GLTSFSRRNF LIGSGLLFAG SVLKVNGAGL LDDPEPIIDI HQHTDFSGRT
QEQLIAHQRK MGITTTVLLP AGRPLNYGST YYGVANGLQV KATGNEVCYK LAQQYPKEYR
FGANEVPDFP GAIQEIEKYL KLGAPVIGEL KFGVECDSPG MQKIYQLAQA YDVPVLMHWQ
YNMFNRGFER FYKMLEKYPK VNFLAHSQTW WANIGKEHKD ENVLYPKGKV VAGGLTDQLL
RNYSNVYGDL SGFSGLYAMT RDEDHARGFL ERHQDKLLYG SDCSDIFGSG EGCTGAQAIA
AIRRFSATKE IERKILFSNA KKLLRL
|
|---|
| |