Gene Phep_1120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1120 
Symbol 
ID8252214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1304885 
End bp1306033 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content40% 
IMG OID644934771 
ProductFecR protein 
Protein accessionYP_003091400 
Protein GI255531028 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.55861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000759776 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAGGA AAGAAGCGCA GGAGTTATTT GACAGGTATA CAGCAAATTT ATGTACTCCG 
GAAGAAAGAG CAATTGTAGA ACGATGGTAT GCTAAAGAGT CAGATTTGCA GCAATTACCG
GAAGTTAAAG ATGTAATTGG GGCAAAAAAT GAAATATGGG ATGGTGTTTT GAAGCAGGCT
GGTTTAGCTG AGCCAGCCCG GAAATCGCCA TTAAGAATCT GGATCAGTTC TGCTGCTGCA
GTGTTCATTT TAATGGCTGC AGGCTTCTAC TTTTATATTT CAAAGTTTAG CCCGGCACCT
TTAGATAAAC AGCAAACGAT TACTGATGTG ATGCCCGGCG GTGATAAAGC AGTACTGACG
CTGGCTGATG GTTCGACTAT TATTTTAGAC CAGGCAAAAA AAGGCATACT TGCTAGTGAG
GGCAATACAT CGGTAAGTAA AACAGACAAT GGCCAGTTGA AGTATGATGT GATGAAAAAT
GGACCTGGTA CTAAAACTGC CGTTACCTAC AATACAGTGA GCACACCAAA AGGTGGGCAA
TATCATGTCA TTCTTCCGGA TGGTACCGGC GTTTGGCTAA ACGCCGTTTC ATCTATAAAG
TTTCCTACGT CATTTGCGAA TAAAGAAAGA AATGTGGAGA TTACAGGGGA AGCTTATTTT
GAAGTAAAAG CAAATGCAGC TAGCCCTTTT ATTGTAAAGG CCGGAGAAAC CAATGTGCGG
GTATTGGGTA CTCATTTTAA TGTGATGGCC TACGCAGATG AAGTGTCCGT AAATACTACT
TTGCTGGAAG GCAGAGTTAA GGTTTTTGCA GGTAAAAATG CAAGTACAAT TATGCCAGGA
CAGCAGGCTG TAACGGCAAA GGGTATGATC AATGTGGCCA ATGTTGATGT TGAAGAGGCC
ATTGCCTGGA AAAATGGCTA TTTTTACTTT AAAGATGCTG ATGTGAAAAC GGTGATGCGA
CAGATTTCAA GATGGTATGA TGTAGATGTG GAATATAAAG GAACTGATTC TGAAACTGCA
TTTTCCGGAA AAATGCATAG AAATGTAAAT ATATCGAAGG TGCTTGAAAT GTTGAGCTAT
TTTAAGATTG ATTATAAAAT AATAGATTCT AGATTTCATA AAGGTAAAAA GACCATAGTG
ATTAACTAA
 
Protein sequence
MNRKEAQELF DRYTANLCTP EERAIVERWY AKESDLQQLP EVKDVIGAKN EIWDGVLKQA 
GLAEPARKSP LRIWISSAAA VFILMAAGFY FYISKFSPAP LDKQQTITDV MPGGDKAVLT
LADGSTIILD QAKKGILASE GNTSVSKTDN GQLKYDVMKN GPGTKTAVTY NTVSTPKGGQ
YHVILPDGTG VWLNAVSSIK FPTSFANKER NVEITGEAYF EVKANAASPF IVKAGETNVR
VLGTHFNVMA YADEVSVNTT LLEGRVKVFA GKNASTIMPG QQAVTAKGMI NVANVDVEEA
IAWKNGYFYF KDADVKTVMR QISRWYDVDV EYKGTDSETA FSGKMHRNVN ISKVLEMLSY
FKIDYKIIDS RFHKGKKTIV IN