| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1102 |
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| Symbol | |
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| ID | 8252196 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1288686 |
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| End bp | 1290119 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644934753 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003091382 |
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| Protein GI | 255531010 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00726953 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000588635 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAAAGAGG TTAAACAGGA ACTGAGCGTA AACCCTGCAT TGATCCATGA GCTGACCATG
GAACAGGCCT GGTATTACAG GATTTTTCCG GAAGAACTGC TGGCGGATAC CTTATGCCTG
TATTGTGAGG AGGGTGCAGA TGTGGCCGCC TTAACAGATG AGCTGGAGGT TTTACTGGGC
AGAACCATTG TTTTGCAAAC GCTTGACCCG CTGGTAATGG CCAGGCTGCT GAACCAGTAT
TACATCAGGG AAGAGCAGCA GACCAGCATC GGCAACCTGA CGCATGACCA TGCTTCTGAT
GATTTCCTGG AAAACCTGAT TGCTGAGGCC AAGCGTTTAA AAAGCAGTGA CATCCATATT
GAAACTTACG AAGAAAAATG CAGGGTGCGG ATCCGGATTG ACGGGATGTT GATTGAGCGT
TACCTGTTGA GCCGCCTGGA ATACCCGGCC ATCATTAACC GGATCAAGAT TCTGGCTAAC
CTGGACATTG CAGAGAAAAG ACTGCCGCAG GATGGCAGGA TCAACTTTAA GACTGCCCAG
CACCAGTTTG ACATCAGGGT ATCGGTGCTG CCCACGCTTT ATGGCGAAAA GGTGGTGCTC
CGCTTATTGA ACAATGATGC CACCAATATA GACCTGTATA CCCTTGGCTT TGCTGAAGGG
GATCTGAACA ATTACCTGGA AGGGGTAAAA AGGCCCAATG GCATTGTACT GATCAGCGGG
CCAACAGGCT CTGGTAAAAC CACCACCCTG TATGCTACAT TGAAACTGCT GAACAAGAAC
ACCAGGAACA TCCTGACCAT TGAAGATCCC ATTGAATATA CGCTGGACGG CATTAACCAG
GTACAGCTGA AAGAGAACAT AGGCCTGACC TTTGCTGCGG CACTCCGCAC TTTTTTAAGG
CAGGACCCGG ATGTGATCAT GGTTGGGGAG ATCCGCGATC CGGAAACGGC CAATATGGCC
ATACGCGCTG CATTAACGGG TCACCTGGTG CTTTCTACCA TCCATACCAA CTCGGCCTGG
GGCACCATAT CGCGTTTGAT GGATATGGGC ATTCCGCCTT TTTTGGTGGC CAATACCTTG
AATACCTCGG TAGCGCAGCG CCTGGTGCGC CTGCTTTGTC CGCATTGTAA AACCCAAAGC
AGCATGGAAC ACAGCCTGTA CCCTAAAAGT TTTAACCCGC CCGAAAAGGT GGATGTGCAT
TGGATGGCAA AGGGCTGCGA CCAGTGCTAT TTTACCGGTT ATAAAGGCCG TAAGGCAGTA
TATGAAGTGA TCCCGCTGGA CCAGGAGCTG GCCTTCCAGA TCAAGGCAGG CAACCAGCAG
CCTGAGGCCT TATTAAAGGA ACGGGGAATT TATACCATTG GTGAAAATGC TTTTGCGCTG
TTTGCCCATG GCCATACCTC ATTAGAAGAA GTTTACCCGC TATTGTATAA TTAA
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| Protein sequence | MKEVKQELSV NPALIHELTM EQAWYYRIFP EELLADTLCL YCEEGADVAA LTDELEVLLG
RTIVLQTLDP LVMARLLNQY YIREEQQTSI GNLTHDHASD DFLENLIAEA KRLKSSDIHI
ETYEEKCRVR IRIDGMLIER YLLSRLEYPA IINRIKILAN LDIAEKRLPQ DGRINFKTAQ
HQFDIRVSVL PTLYGEKVVL RLLNNDATNI DLYTLGFAEG DLNNYLEGVK RPNGIVLISG
PTGSGKTTTL YATLKLLNKN TRNILTIEDP IEYTLDGINQ VQLKENIGLT FAAALRTFLR
QDPDVIMVGE IRDPETANMA IRAALTGHLV LSTIHTNSAW GTISRLMDMG IPPFLVANTL
NTSVAQRLVR LLCPHCKTQS SMEHSLYPKS FNPPEKVDVH WMAKGCDQCY FTGYKGRKAV
YEVIPLDQEL AFQIKAGNQQ PEALLKERGI YTIGENAFAL FAHGHTSLEE VYPLLYN
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