| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1100 |
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| Symbol | |
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| ID | 8252194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1287765 |
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| End bp | 1288172 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644934751 |
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| Product | hypothetical protein |
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| Protein accession | YP_003091380 |
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| Protein GI | 255531008 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00019411 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000227282 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAGAAGTA CCAAATTAAA AGCCTATACC CTTACGGAGA TCCTGGTGGT ACTGGTGATC
ATCGGAATCC TGATCCTGTT GGTTCTGCCC AACCTGATGC CCTTAATTAC CAAGGCGAAA
AACACAGAGG CCAAAATGCA GCTGCAGCAT GCCCATCAGC TGGAAAAGAC CTTCTTTTAT
GAGAAGTCCA AATATTCAAC CGATCTGGCC GAGATTGGTT ACATCCAGGA AAAGCTGAGT
ACAGACGGCA AGGATGGCAA GGCCAATTAC CGCCTGGAAG TGGTTTCGGC CACGGGCAAC
ACCTTCGTGA TCCGTGCCAC AGCCGTGGTC GATTTTGACG GCGACGGGTT ATTTAATGTA
TGGGAGATTG ACCAGGACAA GAATTTAAGG GAAACCGTGC AGGACTGA
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| Protein sequence | MRSTKLKAYT LTEILVVLVI IGILILLVLP NLMPLITKAK NTEAKMQLQH AHQLEKTFFY
EKSKYSTDLA EIGYIQEKLS TDGKDGKANY RLEVVSATGN TFVIRATAVV DFDGDGLFNV
WEIDQDKNLR ETVQD
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