Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1098 |
Symbol | |
ID | 8252192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1283489 |
End bp | 1287007 |
Gene Length | 3519 bp |
Protein Length | 1172 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644934749 |
Product | hypothetical protein |
Protein accession | YP_003091378 |
Protein GI | 255531006 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3209] Rhs family protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00467719 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000319304 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCTCCGTA TCATGAAATT ATATCAGAAT TTAACGCCCC AAAGGGCATG GAAATATATC GCTGTTTGCT TAGTGGCAGG TTTTACCAGT TCAAATGCCC AGCACCTTAC GCTGAACACT TACAGCAACC AGACTGAAAT TAAAGCTACC GGGAGTATAA CGCTGACGGA TGGATTTTAC ATCCCTGCGG GCAAGAATGT AAGGATCTTT ACCGGGGCGA GTTTCCAGCA ATGTGTGGAC CTGGTAAGTA CCCCAAGTGC AGATCAGAAT TACATCAGTA CCAAGGTATT TAAAAAAGAA GGGGTAAATG AAGGGAACAT CAATGCCACA CTGAGTACCT GCGAGGTAAA CCAGACCGTA CAGTATTTTG ATGGATTGGG CAGGCCTTTG CAAACGGTGA CGGTACAGGG CAGTCCCGGC TTTAAGGATG TGGTGCAGCC TGTTGACTAT GATGCCTTTG GCCGGGAGCA GTTCAAATAC CTGCCTTACT CTACTGTTAC AGGTGCCAAT GGCAGCTTTA AGCCTTCTGC AATAACCAGT CAGGCAGGTT TTTACAACAG CCCCCCGGCA GGTGTGGCCA CGATTACAAA CACGGCCTTT TCAGAGAGCA GGTTTGAAGC CTCACCATTG AACCGGGTAC TGGAACGGGG ATCCCCCGGT GCCAGCTGGC AGCTTAGTGC CGGTCATACC CAGAAAATGG AGTACGGCTC CAACAACAGT ACAGACTATG CAGTACGGTT GTATCAGGCT GTACCCTCTG CAACCCCCGG AGAAGAACAC AAACGGATAC TCAGCGGAAC AGGTTATTAC ACTGCCAATG AACTGTACCT GAGCATCAGC AAGGACGAGA ACTGGGCAAG TACCGATGGC AAAGCCGGTA CCACAGAAGA ATATAAGGAC AAAGAGGACA GGGTAGTGCT GAAGCGTGTA TTTAATTATA AAAATGATGT GACTGAAACC CTAAGCACCT ATTATGTGTA TGATGACCTG GGGAACTTAA GTTTTGTGCT GCCACCAGGT GCAAACCCGG ATGCCCTGGC CCTGCCTTCC CAGACACTGC AGGACCAGTT CTGTTACCAG TACCGTTACG ATGGGCGTAA AAGGCTGATT GAAAAGAAGC TTCCGGGCAA GGACTGGGAA TACATGGTGT ACAACAAACT GGACCAGCTG GTGCTGAGCC AGGACTCCTT GCAAAGGGTA GCTAACCAGT GGCTGTTTAC CAAATACGAT GCTTTGGGCA GGGTAGCAAT TACCGGTGTA TACGGAGATG GGGCTTCCAG GAGCAGCCTG GCCGGTACAT TGAACAGCCA GAGCGTACTT TGGGAAAACA GGCTGGGTAG CGGGACCGAT TATGACAACG GTTCATTCCC TCAGAACAAC ATTGCCTGGT ACCATACGAT CAATTACTAC GACGATTACA ATTTTCCGGG CAATAGCTTT CCCCAGCCTG ACGGGGTTAC CCAGATGTCG GCCTCCAGGG TAAAAGGACT GCAGACGGGC AGTTTTGTTT ACCAGGTGAA CAGCAGTACC CGTTACCTGA GCGTGAACTA TTATGACAAA GATGGCCGGG TGCTCAAAAC AGCAGCAGAG AACCATTTGG GCGGTACAGA CCTTACGGAG AATACCTGGA ACTTTGCCGG TGAGCTGACG GGCAGTACCC GTACCCATAG TAGTGGCTCG GGCCCAGCCA CTACTATTGC CACCCGGCAT GAATACGACC ATATGGGAAG GAAGAAGGCG ACCATGGAAT CCATTAACGG TCAGCCTGAA GTGGTGCTGA GCAAGCTGGA CTACAATGAA CTGGGGCAGC TGAGCAAAAA ATGGCTGCAC AGTACAGATG GGAATACCTT TTTGCAACAT ACGGATTATG CCTATAACGA ACGGGGCTGG CTGAAGCGGA GCATTTCAGG CGAGTTTAGC ATCAGGCTTG GTTATGACAC CCTGGGTACT CCACAGTACA ATGGCAATAT TACGAGCCAG GAATGGGGCA CTGGCTATAC CTTTCCGAGC ATTTACAATT ATGGATACGA TAAGCTGAAC CGTTTGCTGA GCGGGGTAAG TACCGGGGCG ATATCGATGA GTGAAGTGCT GAGTTATGAT GTGATGGGCA ACATCAGTAC CCTGAACAGG GATGGAGCAG GAGCGGGCAG CTATATTTAC GAAGGCAACA GGCTGAAGAG CATCTCAGGT GGCGGGCTGG CTGCCGGGAG TTATGCCTAT GACGGGAATG GGAATGCGGT TACCGATGGG CGTACCGGTG TAAACTTAAC CTATAACCAC CTGAACTTAC CCATCACTGT TAATGGATCG GGACTGAACA TTGCCTATAC CTATGATGCA ATGGGCAGGA AACTGAAAAA GGTGAGTAAC ATGGAGGCCC CTTCAGATTA TGTGGATGGG GTACAATACA CCGGAGGGGC AATAGAGTTC ATCATGACCG AGGAGGGTAA AGCGAGGAGC AATGGTGGTA CCTACAGCTA TGAGTATAAC CTGACAGACC ATTTGGGTAA TGTGCGGTAT ACGTTCTACC AACACCCATC ATTGGGTACC TTACAGCCGC TTCAGGCAGA TGATTATTAC GCTTTTGGTA AACAAAGAGT TGCAAGTGCA GGAGTGAATA AATATCTTTA CAATGGCAAG GAGTTGCAAA GTGAGCTGGG ACAGCTCGAT TATGGCGCAA GGTTCTATGA TCCGGTGATT GGAAGGTGGA ATGTGGTGGA TCCGTTGGCG GAGAAATATC ATAGCTATTC TATATACTCT TATGTAGTCA ATAACCCGAT TGCTTTGATT GATCCAAACG GTATGGAAAT ACAAGAGATA GCGGGCGGGG TTAGATTCAC GAAAGAAGAC GCACAAAGTG CTTATCGTGT ATTGACTAGT AAGGCTAAAA ATGTTTATAT GGCAATTGTT GGGGAATCAA GTGTTAGAAG CCGTATTAAT GAGTATCAAA AGAAGAATGG GAACGGACAA TGGGCTGGGT TTGCAGCCAA AAATTTTTCT CAGGCTAATT TAGCTATGAG TGTTTTTGGT GATAAGAGCA TAAATAATTT CGTTTTAGAA ACGCATGGTG GAAATGATGG TGCCGAATCT TTCATGAGGA TTAACGAGGA TGGAAGCAGC AATCCAGAAA GTTATATCTA CAATAATGAA GTAAGTGATT TTAATAAAGG CATTCAGAAT CCAGAGGTTT CTCAACTAAG TGCAATGGCC AGTAAGGTAA AAGACGGAGG AAATTTTATA TTAGCAGCTT GTTATGTAGG TATTGGTGAA CCTGGGAATA AATTTGGACA AAATTTAAGT AAGCTAACTG GGGATAGGTT AAATATTTTT CTACCTCAAA GTTTTGTACA TACAGGAAGG ATAAGTAATC CCAGCGGGAC AACAATCCAA TTTGATGGAA GTTTAAAGGT TGATAATGGT AAAGGGTGGT TAGGGGTGAC TCCTAATGGG AGTATGCAAA ATATTAACAA AATATTGCTT TCACGAACTA CGTACCCACC GGTAAGGATA ATAAAATAG
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Protein sequence | MLRIMKLYQN LTPQRAWKYI AVCLVAGFTS SNAQHLTLNT YSNQTEIKAT GSITLTDGFY IPAGKNVRIF TGASFQQCVD LVSTPSADQN YISTKVFKKE GVNEGNINAT LSTCEVNQTV QYFDGLGRPL QTVTVQGSPG FKDVVQPVDY DAFGREQFKY LPYSTVTGAN GSFKPSAITS QAGFYNSPPA GVATITNTAF SESRFEASPL NRVLERGSPG ASWQLSAGHT QKMEYGSNNS TDYAVRLYQA VPSATPGEEH KRILSGTGYY TANELYLSIS KDENWASTDG KAGTTEEYKD KEDRVVLKRV FNYKNDVTET LSTYYVYDDL GNLSFVLPPG ANPDALALPS QTLQDQFCYQ YRYDGRKRLI EKKLPGKDWE YMVYNKLDQL VLSQDSLQRV ANQWLFTKYD ALGRVAITGV YGDGASRSSL AGTLNSQSVL WENRLGSGTD YDNGSFPQNN IAWYHTINYY DDYNFPGNSF PQPDGVTQMS ASRVKGLQTG SFVYQVNSST RYLSVNYYDK DGRVLKTAAE NHLGGTDLTE NTWNFAGELT GSTRTHSSGS GPATTIATRH EYDHMGRKKA TMESINGQPE VVLSKLDYNE LGQLSKKWLH STDGNTFLQH TDYAYNERGW LKRSISGEFS IRLGYDTLGT PQYNGNITSQ EWGTGYTFPS IYNYGYDKLN RLLSGVSTGA ISMSEVLSYD VMGNISTLNR DGAGAGSYIY EGNRLKSISG GGLAAGSYAY DGNGNAVTDG RTGVNLTYNH LNLPITVNGS GLNIAYTYDA MGRKLKKVSN MEAPSDYVDG VQYTGGAIEF IMTEEGKARS NGGTYSYEYN LTDHLGNVRY TFYQHPSLGT LQPLQADDYY AFGKQRVASA GVNKYLYNGK ELQSELGQLD YGARFYDPVI GRWNVVDPLA EKYHSYSIYS YVVNNPIALI DPNGMEIQEI AGGVRFTKED AQSAYRVLTS KAKNVYMAIV GESSVRSRIN EYQKKNGNGQ WAGFAAKNFS QANLAMSVFG DKSINNFVLE THGGNDGAES FMRINEDGSS NPESYIYNNE VSDFNKGIQN PEVSQLSAMA SKVKDGGNFI LAACYVGIGE PGNKFGQNLS KLTGDRLNIF LPQSFVHTGR ISNPSGTTIQ FDGSLKVDNG KGWLGVTPNG SMQNINKILL SRTTYPPVRI IK
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