Gene Phep_1087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1087 
Symbol 
ID8252181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1273572 
End bp1274015 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content40% 
IMG OID644934738 
Producthypothetical protein 
Protein accessionYP_003091367 
Protein GI255530995 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000445944 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGGTAA GAAAATCAGC CATCATAATG TCTAATGCAA TGATAAAAAA TGATCTGGAG 
ACATTGGCAG ACTACACTCA TCCAAAGATT TTAGCCGCTA TGGGTGGGAA GGATAAAATG
ATTGCACGGA CAAAAGCTTC AATTGCGGAA ATGAAAACTG GTGGAGTGAC TTTTCGGGGT
GCTTCAATCG GGAAAATAGG TCGGTTTTAT ACCAGTGGAA AGGATTTGTA TTGTCTTATT
CCTCATGAAA TATTAATGAA CACGGAAGGT GGTTATTTGA GTAGTACTTC TTCGGTGTTG
GGCATTAGCC ATGATAAAGG TAAAACCTGG AAATTTGTGT CTGCTGGTAA CATTGGCAAA
AAAAGGCTGA AAACCATATT TACAACATTG CCGGATGGAC TGCAAATTTC GCCGCAAACT
ACGCCGGTTT TCCATAAGGA GTAA
 
Protein sequence
MVVRKSAIIM SNAMIKNDLE TLADYTHPKI LAAMGGKDKM IARTKASIAE MKTGGVTFRG 
ASIGKIGRFY TSGKDLYCLI PHEILMNTEG GYLSSTSSVL GISHDKGKTW KFVSAGNIGK
KRLKTIFTTL PDGLQISPQT TPVFHKE