Gene Phep_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1079 
Symbol 
ID8252173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1269833 
End bp1270243 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content43% 
IMG OID644934730 
Producthypothetical protein 
Protein accessionYP_003091359 
Protein GI255530987 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.34565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000234431 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTAATGG CAGCAGATGC ACAGGGCAGG AAAGCCCGCT GGAACTTTTC AGCCAAGAAA 
ATAAAGCCGG GCTTCTATGA GCTGCATTTT ACTGCTGAGG TTGAAGATGG CTGGAATATT
TACAGCCAGT TTACACCGAA AGGTGGGCCA TTGCCAACTT CCATCACCTT TAGCCCTAAT
GACAATGTAT TGCTAGGTGG CAAGGCTAAA GAAGTAGGTT TCAAGCGGGT AAAGCATGAA
GAAGTGTTTG GGGTAGATGT GCACTACTTT GCTGAAAAGG TAGATTTTGT ACAGGTGATG
AAGTTGAAGG TGGTAAAGCC GGATCTAGTA AAAGGTAAGA TCAACTTCAT GACCTGCGAT
AAGCATCAAT GTATAACCGA TGAAGTGGAA TTTAATATTC CACTTAAATA A
 
Protein sequence
MVMAADAQGR KARWNFSAKK IKPGFYELHF TAEVEDGWNI YSQFTPKGGP LPTSITFSPN 
DNVLLGGKAK EVGFKRVKHE EVFGVDVHYF AEKVDFVQVM KLKVVKPDLV KGKINFMTCD
KHQCITDEVE FNIPLK