Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1072 |
Symbol | |
ID | 8252166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1259301 |
End bp | 1260473 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644934723 |
Product | AAA ATPase |
Protein accession | YP_003091352 |
Protein GI | 255530980 |
COG category | [R] General function prediction only |
COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.352616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTAA GAAGAGTAGA AAAACAAGTC GAAGAAGCAC TCAAAAGAAG CGCTTCTGTA GCATTAATGG GACCGCGTCA GGTTGGAAAA ACAACCATTG CAATGAACAT CAGTGACACA ACAACTGCTG TTTATCTTGA TTTGGAGGAT AGCCTTGATC TTCAAAAAAT CCAGGATGTA AGTGCGTTCC ACGAAGAAAA TCGTGATCAT CTGATTATCA TGGATGAGGT TCAACGGGTA CCTGAAATAT TTGCATCACT TCGCGGAATC ATTGACAAAG AGCGTAGGAG AGGACATAAA TATGGACAGT TTTTATTTCT GGGATCCGCC TCTATGGATT TGCTTCAACA GTCCAGTGAG TCGCTTGCAG GTAGGATTGC TTATATAGAA CTCCAAGGTG TTGATGCTTT AGAATTTAAG GCTAACAATG CTGAAAACCA AAACCAGCTT TGGTTAAGAG GGGGATTTCC TGAAAGCCTG CTCGCTGATA GTGATAAGAA TAGTATGGCA TGGAGGCGTG ATTTTATCAG AACCTACCTT GAACGAGATA TTCCACTTTT AGGACCCCGC ATTCCAGCTG TCACACTGGA AAGATTCTGG ACGATGCTTG CGCATGTTCA GGGAGGAATG ACCAATGCTT CACAAATTTC TAAAAGTCTG GAAGTCACTT CAACAACAGT GAGCAGATAT CTGGATCTGA TGGTTGATTT ATTATTAGTA CGCCGCTTAC AACCCTGGAC TCAAAATGTT GGAAAACGTC TGGTAAAAAC TCCAAAAGTA TATGTAAGAG ATAGTGGAAT TACGCATGCC TTGCTTAATT TGGAAAGCTA TAATGATCTG CTTGGCCACC CAGTAGCAGG AGGAAGCTGG GAAGGATTTG TGATTGAAAA TATCTTATCG GTTGCGCCCA ATAATGTTAT TCCATATTAT TACAGAACTT CTAATGGGGC GGAAATAGAC TTAGTTTTGG AGTTCTCCGG TAATGAGAAA TGGGCTATAG AAATTAAGCG GAACTCTGCA CCAACACTGT CTAAAGGATT TCATATAGCC TGTCAGGACA TCAACCCAAG TAAGAGGTTT GTTGTTTATT CAGGCCAGGA TAGATTCCCA ATGGCAGAAA ATATAACTGC GATCTCTCTT TGCGGCATAA TGGAAGAATT GCTGACCAAG TAG
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Protein sequence | MILRRVEKQV EEALKRSASV ALMGPRQVGK TTIAMNISDT TTAVYLDLED SLDLQKIQDV SAFHEENRDH LIIMDEVQRV PEIFASLRGI IDKERRRGHK YGQFLFLGSA SMDLLQQSSE SLAGRIAYIE LQGVDALEFK ANNAENQNQL WLRGGFPESL LADSDKNSMA WRRDFIRTYL ERDIPLLGPR IPAVTLERFW TMLAHVQGGM TNASQISKSL EVTSTTVSRY LDLMVDLLLV RRLQPWTQNV GKRLVKTPKV YVRDSGITHA LLNLESYNDL LGHPVAGGSW EGFVIENILS VAPNNVIPYY YRTSNGAEID LVLEFSGNEK WAIEIKRNSA PTLSKGFHIA CQDINPSKRF VVYSGQDRFP MAENITAISL CGIMEELLTK
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