Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_1070 |
Symbol | |
ID | 8252164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1257420 |
End bp | 1258283 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644934721 |
Product | hypothetical protein |
Protein accession | YP_003091350 |
Protein GI | 255530978 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01784] conserved hypothetical protein (putative transposase or invertase) |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.950669 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAAACC AAACTATACA AACCACCACT TATATCGATC CATTTTTAGA TGTCGCTTTT AAACGGTTAT TTGCCACAGA TGAAAGTAAG CCAATACTCA TCGGTTTTTT AAATGAGTTG TATAAAGGTA AAAAGTACAT TACAGAAATC CAGTTCGGAA AAAACGAATA TCATGGCGAA ATAAAAGAAG AGGGAGGTGT GGTATTCGAC ATAGTTTGTA CCGATGCCGA CGGAAGCAGG TTTATTATCG AGGTTCAAAC CGGTTACCAG AAATATTTTA AAGAACGTGC TTTGTACTAT ACTTCAAGGG CCATCAGCGA ACAATCACCA AAAGGAAAAA TAAAAGGATG GGCTTATAAC ATCTCAGAAG TTTACCTGCT GGCCTTCCTG GAAAACTTTA ACCTCCCCGA CACCCCCAGA TATGAATACC TGCAGGATAT ATGCCTGGCC AACAGGCATA CAGGAAAAAT ATTTTACGAT AAACTCAGCT TTATATTTAT AGAGATGCTT AACTTTGTGA AGAAGCCGCA TGAATTGCAT ACAGAACTGG ATAAATGGTT ATATGCATTA AAACATTTAA CAGAATTTAA ACAGCGTCCT GCATATTTAT CCGGCCCGGA ATTTGATCAG TTTTTTGCAT TAGCTAAATA CGCCAACCTG ACTAAGGAGG AAAGAGATAT GTACAATACA AGTTTAAAGC AGAAATGGGA CAGTAAAAAT GTGTTGGATT ATGCTGTAGA AGAAGCAAAA CACAAAAAAG CTGTTGAAAT TGCCCGTCAA ATGTTATCTG ACAACTTGCC TATTGATCAG ATTATAAAAT ATACCAAACT TTCAAAAGAA GAAATCCAGG CCCTTCAAAA ATAA
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Protein sequence | MPNQTIQTTT YIDPFLDVAF KRLFATDESK PILIGFLNEL YKGKKYITEI QFGKNEYHGE IKEEGGVVFD IVCTDADGSR FIIEVQTGYQ KYFKERALYY TSRAISEQSP KGKIKGWAYN ISEVYLLAFL ENFNLPDTPR YEYLQDICLA NRHTGKIFYD KLSFIFIEML NFVKKPHELH TELDKWLYAL KHLTEFKQRP AYLSGPEFDQ FFALAKYANL TKEERDMYNT SLKQKWDSKN VLDYAVEEAK HKKAVEIARQ MLSDNLPIDQ IIKYTKLSKE EIQALQK
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