Gene Phep_1066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1066 
Symbol 
ID8252160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1253539 
End bp1254402 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content39% 
IMG OID644934718 
Producthypothetical protein 
Protein accessionYP_003091347 
Protein GI255530975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAT CATTTTTATC ATTCGCACTA TTTACAATTT GGATTTTTTC TGCCCAAGCC 
CAGATACCAA CGGCAATAGT TACTGGTCCG GGTACAACCT ATGTGTATGT AGGAAGTTTA
TTAAAAAGCA CCGATGACAC TGGGAATTCT CAAAAAATAG CTATTAAAAT AATTGGGGGT
TCCTGGTTTT CAGATTCTAA CGGAGAGACC AATTTCTATA TATCAAACAG AGAAGGTCTT
GACATTAAAC AAGTAAGTAT AGGAAGCTCT TTCGGTGATA GATTAAGCTT GAAAGCTTAT
CAAAATAGCA CAAGCATTGA CTTTTACCTT GAGCCCCGCG CAGATAGTTA TACCTCCTTT
GCGGTAACTT CTTTTACTTA TGGGAGTGCT GTAAGTTCAC AGTTTATAAC AATTACAAGT
CAGACAACGG CGCCAACTGC GACAGATATT ACTTCTTCTT TGGTTATATC TCCAATCACA
ATGACTAACG GAGCAGGCGA TATGGGGATT GGAACAAACG ATCCCAAAGG CTACAAACTA
GCCGTTAACG GCAAAATCAG AACGCAGGAA ATCAAAGTAG AAAATACTAA CTGGCCGGAT
TATGTTTTCA CCAAAGATTA CCAACTCCCA ACTCTCCGAC AAACAGAGCA ACATATCAAA
GAAAAAGGCC ATTTGCCCGG CATCCCGTCA GCTGCTGAAG TGAAAGCTAA TGGTATTGAT
TTAGGGGAAA TGAATGCGAA GCTATTACAG AAGATTGAAG AACTGACTTT GCATTTGATT
GAACAGAATA AGGGCCAAAA AGAACTTCAG GAAGAAGTTC AAAGCTTAAA AAATGAAGTA
TCCAATTTAA AGTCTAAACG ATGA
 
Protein sequence
MKRSFLSFAL FTIWIFSAQA QIPTAIVTGP GTTYVYVGSL LKSTDDTGNS QKIAIKIIGG 
SWFSDSNGET NFYISNREGL DIKQVSIGSS FGDRLSLKAY QNSTSIDFYL EPRADSYTSF
AVTSFTYGSA VSSQFITITS QTTAPTATDI TSSLVISPIT MTNGAGDMGI GTNDPKGYKL
AVNGKIRTQE IKVENTNWPD YVFTKDYQLP TLRQTEQHIK EKGHLPGIPS AAEVKANGID
LGEMNAKLLQ KIEELTLHLI EQNKGQKELQ EEVQSLKNEV SNLKSKR