Gene Phep_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1062 
Symbol 
ID8252156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1249264 
End bp1250253 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content39% 
IMG OID644934714 
Producthypothetical protein 
Protein accessionYP_003091343 
Protein GI255530971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA TAAATAAAAT AATCTGGTTC ATACTTATAT TCCCTGTGGT TGGAAATGCA 
CAGGTTCTGG GACCTGATCA GGGAAATAAT GTCGAAATTT CATCAATCGC AGGCGCTAGT
CAGAATTCAT TCATGAATAA ACAGTGGTTG TATCGCAGCC AGAACGGGAA TGATTGGACC
AGTACAAGGT TACACAACGG GATTAGCATA GACAATTCAT TTCTTGTGCC AGGAGTTAGC
TCAAAAACCT GGTGGGAAAG AGATCCGTAT AATAACGTTC AATCCTGGGG AAATGCTGCA
AATACATATT TAACAATTAA TCAGGGTAAT ATTGGTATTG GTACAGCAGA TCCAGGAAGC
AGAAAGCTAA AACTTGTAAC CGCTTCAGCA GAAACCGACG TTGGTATAGA AGTTGAAATT
GGTCGCACAA CTGGAACCAA TTATGGCGTT GTTGGCAAAG CAATAGGTTT TGGGGCCAAC
ACCAATATAG GTCTTTTTAC TGCTGCAACC GGGGCTACAT CTAACCTTGG GTTAAGAATA
TATAATGTTG CCAGTGCAAC TGGTAGTTAT GCAATTTATA GTGACTCACC AGCACAATCT
TATTTTCAGG GAAACGTGGG GATTGGGATT GAAACACCTA CAGACAAACT TGTAGTAAAT
GGAAACATTC GTGCACGTGA AATCAAAGTT GAAAATGCCA ACTGGCCTGA TTATGTATTT
ACAAGAGACT ACCAACTCCC AACCCTCCAA CAAACAGAAA ATCACATCAA AGAAAAGGGC
CATTTGCCAG GCATCCCGTC CGCTGCAGAA GTAAAGGCCA ATGGAATTGA TTTAGGGGAA
ATGAATGCAA AGCTGTTGCA GAAGATTGAA GAACTCACTT TGCATTTAAC TGAAAAAGAG
AAACAGTTAA ATCATGAAAA AAACATCAAT CTAAATCAAG AGGATAGATT AAAACAGTTA
GAGTTGAAAA TAGAACAATT AAATAAATAA
 
Protein sequence
MKIINKIIWF ILIFPVVGNA QVLGPDQGNN VEISSIAGAS QNSFMNKQWL YRSQNGNDWT 
STRLHNGISI DNSFLVPGVS SKTWWERDPY NNVQSWGNAA NTYLTINQGN IGIGTADPGS
RKLKLVTASA ETDVGIEVEI GRTTGTNYGV VGKAIGFGAN TNIGLFTAAT GATSNLGLRI
YNVASATGSY AIYSDSPAQS YFQGNVGIGI ETPTDKLVVN GNIRAREIKV ENANWPDYVF
TRDYQLPTLQ QTENHIKEKG HLPGIPSAAE VKANGIDLGE MNAKLLQKIE ELTLHLTEKE
KQLNHEKNIN LNQEDRLKQL ELKIEQLNK