Gene Phep_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1060 
Symbol 
ID8252154 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1247353 
End bp1248189 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content39% 
IMG OID644934712 
Producthypothetical protein 
Protein accessionYP_003091341 
Protein GI255530969 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGT TTAAGAAATA TATCATTTTG GCCCTATTGG TATTAATAGG ATTAAAAGGG 
AGTACACAAA CTAACTCATT TCCTACGCCT TATGGATATG CCCAAATAAG AGATGATGCA
AACTCACCAA TAGCTTTTAT ACAAAGTACC ATTGATTGTA CATATTTTGG AAATATTGGC
AATAACCCCA TTGCTTTTGG AAATGCTTCT GGCTATAAAA AAATGATAAT TCAAGACAAT
GGCAATGTGG GTCTTGGTAA TCCTAACCCA GGATCGAGAT TGAGCTTTCC TAACGTTGAT
GGTACCACAG AAGCAGAGGG AATCACATGG TATAGTCCCA CACGTACTGT ATATGGTATT
CACAGAACAG AAGGGGCATG GACTTCTCCC AATTACCAGC AATTAAGATT AGGTTGGGAA
ACTGGGATTA TACTAGATCC AGGGCAGGGT TATGGTAAAA GTTATGTAGA TGTGCAAGGT
GCGGGATTAA GAGTAACTTC TGGTGATATT GGAATTGGAA CTGTAGATAC TAAAGGTTAT
AAACTAGCTG TTAATGGAAA CATTCGGGCC AAAGAAGTGA AGGTTGAAAC TGCCAACTGG
CCCGACTATG TATTCACGAA AGATTACCAG CTACCTACCC TCCAGCAAAC CGAAAACCAC
ATCAAAGAAA AAGGGCATTT ACCCGGCATC CCATCAGCTG CGGAAGTAAA AGCCAATGGT
ATTGATTTGG GTGAAATGAA TGCGAAGCTG CTGCAGAAAA TAGAGGAGCT GACATTGCAT
TTGATTGAAA TGAAGAAAGA AATAACAGAG CTTAGATCAA ATAGAAACAA GCTTTAG
 
Protein sequence
MKMFKKYIIL ALLVLIGLKG STQTNSFPTP YGYAQIRDDA NSPIAFIQST IDCTYFGNIG 
NNPIAFGNAS GYKKMIIQDN GNVGLGNPNP GSRLSFPNVD GTTEAEGITW YSPTRTVYGI
HRTEGAWTSP NYQQLRLGWE TGIILDPGQG YGKSYVDVQG AGLRVTSGDI GIGTVDTKGY
KLAVNGNIRA KEVKVETANW PDYVFTKDYQ LPTLQQTENH IKEKGHLPGI PSAAEVKANG
IDLGEMNAKL LQKIEELTLH LIEMKKEITE LRSNRNKL