Gene Phep_1058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1058 
Symbol 
ID8252152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1245697 
End bp1246638 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content39% 
IMG OID644934710 
Producthypothetical protein 
Protein accessionYP_003091339 
Protein GI255530967 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA CGGCTATTAT CTGTCTCTTG TTCTTCATAT CAATAAAGGG GATTTCGCAA 
ACCAGTCTGG ATCAGAATGG GCTTAAAACA ACAGTAACCA ATACATTGCT GAACTCAAGT
CTACAAGCTA TGCGGTATGA AATAGCGGCG GTTGGCTTTA ATCCATATCA TTGGCAATAT
GGGGGCTCAA TTATAATTGA ATTATTTCAC CAATACTATG CAAGTGGTTA TGAAAAATAT
TCATTGGGAA TTAGCTATGG AAGTCCAGCT TTAAGATTAA TTGAATCGCA TGGGGTTATG
CATACAGCGA TGATTAGTCT GGGTACGACA AGTGATTTAA GCACCTCAAC CAGTGGTGTG
ATAAATAAGG TACTACCTGT TTATTTAGAT CTGCAATCTT ATGCCGGATA TAAGGTAAGG
ATAACATACA TGCAGGAAAA AGTTGACGAA GTAACCGATC GAAACCAAAT ACAAACCAAT
ACAAACCCAT CAGGTGTAAT CATTCCCGAC TTTGTTGTTT CAACCGTCTT ATACAATAAC
ATATACTCTT CCGGAAACTT AATGCTTAGC GGAAATGGAC CGCACTATAT AGAAAATGGT
GATGTAGGCA TAGGCACTAC CGACCCTAAA GGTTATAAAC TAGCAGTTAA TGGCAAAATA
CGAGCTCAGG AGATTAAAGT AGAGGCTTCC CCATGGCCGG ATTATGTCTT TACCAAAGAT
TACCAACTAC CTACCCTTCA ACAAACAGAA AACCACATCA AAGAAAAAGG CCATTTGCCC
GGCATCCCGT CCGCTGAAGA AGTAAAAGCC AATGGAATTG ATTTGGGGGA AATGAATGCG
AAGCTGTTGC AGAAGATTGA AGAGTTGACG CTGCATGCAA TAGAGCAGAA TAGGAAAATA
ATGAATCTGG AAGAAATTAT TGGAAGAAAC AATCTCAAAT AA
 
Protein sequence
MKKTAIICLL FFISIKGISQ TSLDQNGLKT TVTNTLLNSS LQAMRYEIAA VGFNPYHWQY 
GGSIIIELFH QYYASGYEKY SLGISYGSPA LRLIESHGVM HTAMISLGTT SDLSTSTSGV
INKVLPVYLD LQSYAGYKVR ITYMQEKVDE VTDRNQIQTN TNPSGVIIPD FVVSTVLYNN
IYSSGNLMLS GNGPHYIENG DVGIGTTDPK GYKLAVNGKI RAQEIKVEAS PWPDYVFTKD
YQLPTLQQTE NHIKEKGHLP GIPSAEEVKA NGIDLGEMNA KLLQKIEELT LHAIEQNRKI
MNLEEIIGRN NLK