| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1057 |
|---|
| Symbol | |
|---|
| ID | 8252151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1244692 |
|---|
| End bp | 1245675 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644934709 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003091338 |
|---|
| Protein GI | 255530966 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AGCAAATATC ATTTTTATGT ATAATATTAG TTTTGTCTAA AATAGCAATG
GCTCAAAATG CCCTTCCAAA TAGCGGAAAC ATAGGCGTCG GGCTGTTAAA TCCAACCAAA
GCTATACAGA TTGGTGATTA TGGATACGGT AACGATAATT CCCAGATTCT AATACCGGGA
GTATATAACT TTGAAAAGGT TAGACTTGGC CAATTGGGAA ATGGAAACAG TACTCTGGAA
TTTGTAAATC ATACTGGAAT TGGAAGTTCG TATGGCGTAA GGTTATTGGC AAATATAGAT
TCGGGGGGGC AAGGCCTTCA ATTTCAGTAT GCTGCAACGA AGGGGGCTTA CGAGGAGTTG
AATTATCAAA CAGGAATGTT TTTAACAACT AATGGCCGAG TAGGGATAGG AACACTAGGT
CCTGAATCCA TCTTTCACGT TCAATCGGAT GCAAATACAT CTGGAGCCCC ACAGAACTCG
CAGTTATTAG TTTCGGGAAC CACGAATCCG GGTAAAAGAC TTTCAATAGC ATACAATACT
TCTTCTAATT ACGCTGAAAT GCAGTCTCAA GCTTATTCTG GCACTTACAC TCCAATATTG
CTTAATCCAA ATGGTGGTGA TATAGGTATC GGCACAACGG ATCCTAAAGG ATATAAACTT
GCCGTTAATG GAAATATACG TGCCAAGGAA ATCAAAGTAG AAAATACCAA CTGGCCAGAT
TATGTCTTCA CCAAAGATTA CCAGCTCCCA ACCCTCCAAC AAACAGAAAA CCACATCAAA
GAAAAGGGCT ATTTACCCGG AATTCCATCA GCTGAAGAAG TAAAAGCCAA TGGTATTGAT
TTAGGGGAAA TGAATGCGAA GTTATTGCAG AAGATCGAAG AGTTAACCTT GTATTTGATA
GAGCAGAATA AGAAAATGGA CGGAGTTCAA AAGGAAAACG AAAGTATGAA GGAAAGGATT
TTAAATCTGG AAAAGAAAAT CTAA
|
|---|
| Protein sequence | MKNKQISFLC IILVLSKIAM AQNALPNSGN IGVGLLNPTK AIQIGDYGYG NDNSQILIPG
VYNFEKVRLG QLGNGNSTLE FVNHTGIGSS YGVRLLANID SGGQGLQFQY AATKGAYEEL
NYQTGMFLTT NGRVGIGTLG PESIFHVQSD ANTSGAPQNS QLLVSGTTNP GKRLSIAYNT
SSNYAEMQSQ AYSGTYTPIL LNPNGGDIGI GTTDPKGYKL AVNGNIRAKE IKVENTNWPD
YVFTKDYQLP TLQQTENHIK EKGYLPGIPS AEEVKANGID LGEMNAKLLQ KIEELTLYLI
EQNKKMDGVQ KENESMKERI LNLEKKI
|
|---|
| |