Gene Phep_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1055 
Symbol 
ID8252149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1242799 
End bp1243731 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content38% 
IMG OID644934707 
Producthypothetical protein 
Protein accessionYP_003091336 
Protein GI255530964 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.545321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAG CAGGGATTTT ATTAAGTCTG ATATGCAGCT GTTGTTTTGC CAATGCCCAA 
ACACTACAAA CAGTAACAGA TAATGGCGCC TCTACAACCA ATACAATCAA TTCTTATAAT
CCTAATGGTT TCCAGATTAC TGGCACTGTA GGAAGCGCCG CTTACTTTGT TATTGATCAG
ACAGCTAACA CTGGTGGTAA AAGATGGAGA TTTGGACACA CTGGTGGTGC GCCTGGTTTT
GGCAGTTTTG ATATTAGCAA TTTAACGGAT GAAATTGTGC CTTTATCTAT AGCTTCTGAT
GGGAAAGTGA CTACTGGAAG ATTATTGGTA AATACCCCTC CGGTCGATAA TACTAATGAA
GGATTACAGG TTAAGTCTGG GCTATCAATT TATGGCAGTG CAAATAATTT GGGAAATCAC
ATTATGTTTA AAAGGTCAGA AGGTGCTGAA ATGGCTTATT TAGGATGGGA AGATGAATCA
TCAGGGAATT CCCCTTTTAT AATTAAATCT TCTAACGGGA ATGATATAAA ATTTATGATT
AATGACGGAG AACAGATGAG GTTAAAGAAT GGTAATCTAA GCATCGGTTC TCCAAATTCT
TATGGCTACA GGCTTGCAGT TAATGGCAAC ATACGAGCTA AAGAAATCAA AGTAGAAAAT
ACCAACTGGC CAGACTATGT CTTTACCACA GACTACCAAC TCCCAACCCT CCAACAAACA
GAGCAACACA TTAAAGAAAG AGGTCATTTG CCCGGCGTCC CATCAGCTGC AGAAGTGAAA
GCCAATGGTA TTGATTTAGG GGAAATGAAT GCAAAGCTGT TGCAGAAGAT TGAAGAATTG
ACTTTGTATT TGATTGAGAT AAAGAAGGAA AGTGATGCAC GCAATGATAA ACAAACTAAA
GAAATCGAAT ATCTAAAATC AAAACTTAAA TAA
 
Protein sequence
MKRAGILLSL ICSCCFANAQ TLQTVTDNGA STTNTINSYN PNGFQITGTV GSAAYFVIDQ 
TANTGGKRWR FGHTGGAPGF GSFDISNLTD EIVPLSIASD GKVTTGRLLV NTPPVDNTNE
GLQVKSGLSI YGSANNLGNH IMFKRSEGAE MAYLGWEDES SGNSPFIIKS SNGNDIKFMI
NDGEQMRLKN GNLSIGSPNS YGYRLAVNGN IRAKEIKVEN TNWPDYVFTT DYQLPTLQQT
EQHIKERGHL PGVPSAAEVK ANGIDLGEMN AKLLQKIEEL TLYLIEIKKE SDARNDKQTK
EIEYLKSKLK