Gene Phep_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1054 
Symbol 
ID8252148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1241903 
End bp1242802 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content38% 
IMG OID644934706 
Producthypothetical protein 
Protein accessionYP_003091335 
Protein GI255530963 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.52466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAAAT ATTTTTTTAC AGTAGTGCTG GCCATGGGAG TATTGGGGGC ATCAGGACAA 
ACGACAAATA TATTTCCAGC GTCAGGTAAT GTAGGGCTTG GAACAACAAG TCCAGCTTAT
AAATTGGATG TCGATGGGGA AGTCAGGATC AATAATACAA TTCTAACAAA TTCCAATTCT
CCATTTGACA ATTCCAGCGT TATGTATACG CAAGCTGGGG CTCATAACAT GTTTGGTGTG
GATGGGGGCT GGATAGATAA ATACTTTGGT ATGAAAACCA ATGGTGATTT CTTAACCATG
GGAGGGAATT TTGGAATCGG TACAAGAAAT CCTGAAGCCA AATTACACGT TGTTGGTAAC
GTAAAACTGT TTGGTAATTA TGATGGAACA AACAATGTTC AGTTTGTTCC ATATAACGGG
CTTGGGAATA CCTGGGAATT GTATCCGCAA CCGGAAGGAT ATGGTATTTT TAACCGCAAT
GCTTATACAT TCCCTTTCTT CATTAGTAAT GGAGATAATA TCGGAATTGG AACTTTAACC
CCTACAGAAA AACTCTCTGT AAAAGGAAAA ATCAGGGCCC AGGAAATCAA AGTAGAAAAT
ACAAACTGGC CAGATTATGT CTTCACCAAA GATTATACCC TCCCAACCCT TCAGCAAACC
GAAAATCACA TTAAAGAAAA AGGTCATTTG CCTGGCATCC CGTCCGCTGC AGAAGTAAAA
GCCAATGGAA TTGATTTGGG GGAAATGAAT GCGAAACTGC TGCAGAAGAT TGAAGAATTA
ACCTTGCATT TAATTGAACA AGACAAGTTT AACAATGACC AAGCTAAATT AATTGGAAAA
CTTCAAGAAA TGAGTAAGTA CCAACAAATA GAGATAAATA ATTTAAAAAA TAAAAAATGA
 
Protein sequence
MRKYFFTVVL AMGVLGASGQ TTNIFPASGN VGLGTTSPAY KLDVDGEVRI NNTILTNSNS 
PFDNSSVMYT QAGAHNMFGV DGGWIDKYFG MKTNGDFLTM GGNFGIGTRN PEAKLHVVGN
VKLFGNYDGT NNVQFVPYNG LGNTWELYPQ PEGYGIFNRN AYTFPFFISN GDNIGIGTLT
PTEKLSVKGK IRAQEIKVEN TNWPDYVFTK DYTLPTLQQT ENHIKEKGHL PGIPSAAEVK
ANGIDLGEMN AKLLQKIEEL TLHLIEQDKF NNDQAKLIGK LQEMSKYQQI EINNLKNKK