| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1045 |
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| Symbol | |
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| ID | 8252139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1228734 |
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| End bp | 1229537 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934698 |
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| Product | regulatory protein LuxR |
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| Protein accession | YP_003091327 |
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| Protein GI | 255530955 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACATTG CGCGTCCGCT CAATTTTACT TTCAAAGGGC ATCTGCAAAA CATCTACTAC
ACCAATGATG CCATTGATGA ACAGCACATT AAGGGGCTTA TGTCCAGATT TGAGCAGATG
AGCATGGCTA TGAACAACAT CACACCCTTG CTTTTTGTGA TTGATTATAC CAAATCCCAG
TACCTGGTCA TGACAGATAG TTGTCGGATC ATCACAGGAC ACCATCCTCA GCAATTGCTG
GAAGGTGGCA TGCCCTTTCT GATTGATATC TATCAGAAAG ATGACTTCAG GATTTATAAT
GAAAACGTGT TTACGGCGAA TGCCAATTTT TTAAAATTGC AGCCCCAGTC TGAACACCAC
AAATTTGTTT TTTCGTATAA TTTCAGGGTA AGAAACAGCG AAGAAAAATA TATCCCTATT
TTTCAGCGGG GAAGCTATAT AACTTCCAGA GAAACAGGTT TACCGCTCTA CAGTTTGGGC
ATGGTTACAG ACATCAGCCC TTTTAAGAAA GACAGGCAAA TTTACCACAG TATAGAAAAA
ATAGAAGAAA GCAATGGAAT CATCACCAAA CAGATCATTG ATGAGAACTA CTTTTTCCCT
TATGCAGAAG ATAAACTGCT ATCGCACCAT GAAAGAGATA TCCTATGTTA TATGGCCGAC
GGGCTGAGCA GCAAGCAGAT TGCTTCCAGG TTCAACATCA GCGAAAATAC GGTAGCCAAC
CACCGGAAGA ACATGCTAAA AAAAACAAAC ACGAAAAATG TTGCCGAACT GGTAAGCTTT
GCCTGCAAAA CTCAGCTGAT ATAA
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| Protein sequence | MNIARPLNFT FKGHLQNIYY TNDAIDEQHI KGLMSRFEQM SMAMNNITPL LFVIDYTKSQ
YLVMTDSCRI ITGHHPQQLL EGGMPFLIDI YQKDDFRIYN ENVFTANANF LKLQPQSEHH
KFVFSYNFRV RNSEEKYIPI FQRGSYITSR ETGLPLYSLG MVTDISPFKK DRQIYHSIEK
IEESNGIITK QIIDENYFFP YAEDKLLSHH ERDILCYMAD GLSSKQIASR FNISENTVAN
HRKNMLKKTN TKNVAELVSF ACKTQLI
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