| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1043 |
|---|
| Symbol | |
|---|
| ID | 8252137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1226859 |
|---|
| End bp | 1227683 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644934696 |
|---|
| Product | putative esterase |
|---|
| Protein accession | YP_003091325 |
|---|
| Protein GI | 255530953 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0627] Predicted esterase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAGAT CACTTTTTCT TGCCGGCGTG ATGCTGCTGT TTGGTATACA GCTAACTTTT
GCCGCTAAGG TAGATACGGT GCAGACCTAC AGTGCATCGA TGAAGAAAAA CATTAAAGCT
GTTGTCATTA CACCAGATAG CTACGCTGAA GGTAAAACCT ATCCTGTTGT ATACTTATTG
CACGGTGCGG GTGGCAATTA TGCCAACTGG ATCAATATTG CACCCGAACT GGGTCAATAT
GCCGACCAAT ACCAAACCCT CATTGTTTGC CCGGATGGTA ATGTAACCAG CTGGTATTTT
GACAGTCCGG TAGATCCGGA ATGGAAATAT GAAACTTATG TGGCCACCGA ACTGGTAAAC
TGGATAGATA AGAACTATAA AACGGTAAAA GACCGTAAGG GACGCGCTAT TGCGGGCCTA
AGCATGGGAG GACATGGTGC CTTATACCTT TCTTTCAGGC ATCAGGATAC TTTTGGGGCG
GCCGGTAGTA TGAGTGGCGG GGTGGATTTT ACCTCTTTTC CCCTGAACTG GAATATCGCC
AAAAGGTTGG GCGATTATGA TAAGTTCCCG CAACGCTGGA AAGACAATAC CATCGTTAAT
ATGATCCATT TGCTGGTGCC CAACCGCCTG GCACTGATCA TCGATTGCGG CAAAGAGGAT
TTCTTTTACG AGGTAAACAT GAAACTTCAT GAAGCGTTGC AGTACAGCAA TATCCCGCAT
GATTTTATCA TCAGGCCAGG TGCGCACAAT GGGCAATACT GGAACAATGC GGTTAAGTAC
CAGCTGTTAT TTTTTAATGG TTTTTTTAAT AAGAAGGGAA AATAA
|
|---|
| Protein sequence | MRRSLFLAGV MLLFGIQLTF AAKVDTVQTY SASMKKNIKA VVITPDSYAE GKTYPVVYLL
HGAGGNYANW INIAPELGQY ADQYQTLIVC PDGNVTSWYF DSPVDPEWKY ETYVATELVN
WIDKNYKTVK DRKGRAIAGL SMGGHGALYL SFRHQDTFGA AGSMSGGVDF TSFPLNWNIA
KRLGDYDKFP QRWKDNTIVN MIHLLVPNRL ALIIDCGKED FFYEVNMKLH EALQYSNIPH
DFIIRPGAHN GQYWNNAVKY QLLFFNGFFN KKGK
|
|---|
| |