Gene Phep_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1037 
Symbol 
ID8252131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1212712 
End bp1213938 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content43% 
IMG OID644934690 
ProductFecR protein 
Protein accessionYP_003091319 
Protein GI255530947 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.929522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAATG ATGAGGCATA CAACTGGCCT GTGTACCATA ATGGCCATGT TATTGGTAAA 
ATATCTTACA ATGAGCTGAT GGCTTTTCTT GACCATAAGG AAGATGCGGG CAACATTTAT
TCTCATAAAC TGCATTTTGA CCTTGGCAGT GTATTGGTTG CCCTAAGGGA CATGCGAACC
GATAAGTATA AAAAACCACA ACAGGCCATC TCTAAAAAAT TGGTTGCAGG TTTAAGTTCT
GTAGCTGTAA TTACTATGGC GTTAATTGGC CTGAGCTGGA TGTTTTTTAA ATCCAATACA
GCCCTGCCTG ATGAAAATAC TACCACCATC GTTTCCGATA AAATTGCATT AACCTTAGGC
AGTGGCGAAC AGCTGCTATT GGATGATACC AAAAAAGGAG TGGTTATAAA CGCCGGTAGT
TTAACCTACA ATGATGGAAC TTCCATTCCT GTTACCTCCC AAAAACAAGC TGCAGGGCTG
ACATTGCATA CTCCACGTGG AGAGCAGTAT CAGGTTACCC TACCCGATGG CACAAAAGTT
TGGTTAAATG CAACCAGCCA CCTGAAATTT CCTTCAACCT TTGCGGGACT GACCGAACGG
AGGGTGAGCC TGGATGGGGA AGCTTATTTT GAAGTAGCTA AAATAAGCAG CAATACAAAT
GGTAAAATAC GCAGGATACC CTTTATTGTG GAAAGCAAAG GTCAGGAAAT AGAGGTTTTA
GGAACGCACT TCGATGTGAG GGCCTACAAC AATGAAGCTG AAGTAAAAAC TACTTTGGTT
GAAGGAAGCG TAAGGGTTAC CCCATCATCC CGAAATAATG AACTTGCTAA AAGCCCCGAC
CCGTCATTGC TCGATCCCAT GCGTACGAAT GGTGTTAAAC CAGCTGGTTA CTACCTTAAA
TTAAGCCAGG CAGTGGTGCT TAAGCCCAAT CAGCAAGCCG TCCTGACAGG CTCGGCTTTA
GCTGTAAAAA GTATAGATGT TGAGGAAGCC CTGGCCTGGA AAAACGGAGA ATTCGCATTC
AGGAATATGC CTTTGGAAAA TGTTATGCGC ATAGTTGCCT GCTGGTACGA TGTAGATGTT
GTTTATCAGA ACAAAACTCC GGATAATGCG CTTTTAGGTG GTACCATCTC TAAAACCGCA
AATATTGTAG AAGTGCTGGA TATGCTTGAA GTAATTGCAA ATGTTAAGTT TAAAGTGGAA
GGCAGAAAGG TTACTGTTGT ACAATAA
 
Protein sequence
MRNDEAYNWP VYHNGHVIGK ISYNELMAFL DHKEDAGNIY SHKLHFDLGS VLVALRDMRT 
DKYKKPQQAI SKKLVAGLSS VAVITMALIG LSWMFFKSNT ALPDENTTTI VSDKIALTLG
SGEQLLLDDT KKGVVINAGS LTYNDGTSIP VTSQKQAAGL TLHTPRGEQY QVTLPDGTKV
WLNATSHLKF PSTFAGLTER RVSLDGEAYF EVAKISSNTN GKIRRIPFIV ESKGQEIEVL
GTHFDVRAYN NEAEVKTTLV EGSVRVTPSS RNNELAKSPD PSLLDPMRTN GVKPAGYYLK
LSQAVVLKPN QQAVLTGSAL AVKSIDVEEA LAWKNGEFAF RNMPLENVMR IVACWYDVDV
VYQNKTPDNA LLGGTISKTA NIVEVLDMLE VIANVKFKVE GRKVTVVQ