| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1024 |
|---|
| Symbol | |
|---|
| ID | 8252118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1200501 |
|---|
| End bp | 1201895 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644934678 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003091307 |
|---|
| Protein GI | 255530935 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.315415 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACG CTAAATTTAA TTACCTCATG GTATTTTTGT TCGCCCTTTC CTGCAAATCT
CCTTCTACGG AAAACGATGC AAAAATTAAA CTGATTACAC TGGATCCTGG TCATTTCCAT
GCAGCCCTTG TACAAAAATC CATGTATCCT GATGTAGATT CAACAGTTTA CGTTTATGCA
GCAGCGGGGA AGGACCTTGA TCAGCACCTC GAAAAAATCG AAGGATATAA CCATGCTGCT
GAAAACCCCA CTCATTGGAA AGAAGAAGTT TACAGGGGAA AGGACTTCCT GCAACGTATG
ATTGCCGATA AAAAGGGCAA TGTAGTGGTA ATAGCTGGAA ATAACCATTT TAAAACTGCC
TATATTGATG CTGCAGTGAA AGGAGGCTTC AATGTGCTGG CCGATAAACC AATGGCTATT
GATGCAGCAA ATTTTGAGCT GCTTAAAACT GCTTTTTCGA TGGCTGCTGA TAAAAAACTG
CTGTTGTACG ACATCATGAC CGAGCGGTCT GAAATTACCA ATATCCTGCA GCGCGAGCTG
GCCGCCATAC CGGAAATTTT CGGCAGCCTT CAGAAAGGTA GTCCGCAACA ACCTGCGGTA
GAGATGGAAA GTATACATTA TTTTTATAAA TACGTGTCCG GTAAAATCCT GACCAGGCCA
TCCTGGTTTA TGGATACCAG TCAGCAGGGC GAAGGCATAG CCGATGTGGC CGTTCACCTT
GTCGACCTGG TGCAATGGGC CTGTTTCCCC GATCAGGTTA TCCGTTACGA AAAGGACATT
CAGTTAAACA GCGCCAGTCG CTGGCCCACT GCAATTACTT TAAGCCAGTT CAATGCCATC
ACAAAAAGCA ATGGTTTCCC CGATTACTTA AAGAAAGATG TAAAAGATAC CCTGTTAAAT
GTGTTTGCCA ATGGCGAGAT CAATTATAAA CTACGGGATG TATATGTAAA GGTAAGGGCC
CTATGGGATT ACAAAGCAAA AGCCGGTGGC GATTCACACT ATGCTGTTTT CAGGGGCACA
AAAGCCGATC TGGTCATCAG GCAGGGAGCA GATCAGGATT TTAAACCCAG CTTGTATATT
TTGCCATCTG TTTCACCGGC AAATCTGTTT GCTTACGAAC AAGCGCTTAA TGATAAGATA
AATGTTGTTA AAGCCAGGTA TCCTGGTATA GAACTGAAAA AAATAGATAA AGGCTGGGAA
GTACTTATTC CTGAGCAATA TAAAAATGGG CATGAGGCAC ATTTTGCACA GGTAACCACC
AGGTTTTTAG CTTATTTAAA AAATGGAAAT ATGCCAGCCT GGGAAGTTCC GAATATGCTG
GCCAAATATT ATACCACTAC GCAAGCCTTA TCATTGGCCA TTAAAGAAGG AGAACTGAAG
AAAAATGGGA AATAA
|
|---|
| Protein sequence | MKYAKFNYLM VFLFALSCKS PSTENDAKIK LITLDPGHFH AALVQKSMYP DVDSTVYVYA
AAGKDLDQHL EKIEGYNHAA ENPTHWKEEV YRGKDFLQRM IADKKGNVVV IAGNNHFKTA
YIDAAVKGGF NVLADKPMAI DAANFELLKT AFSMAADKKL LLYDIMTERS EITNILQREL
AAIPEIFGSL QKGSPQQPAV EMESIHYFYK YVSGKILTRP SWFMDTSQQG EGIADVAVHL
VDLVQWACFP DQVIRYEKDI QLNSASRWPT AITLSQFNAI TKSNGFPDYL KKDVKDTLLN
VFANGEINYK LRDVYVKVRA LWDYKAKAGG DSHYAVFRGT KADLVIRQGA DQDFKPSLYI
LPSVSPANLF AYEQALNDKI NVVKARYPGI ELKKIDKGWE VLIPEQYKNG HEAHFAQVTT
RFLAYLKNGN MPAWEVPNML AKYYTTTQAL SLAIKEGELK KNGK
|
|---|
| |