Gene Phep_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_1007 
Symbol 
ID8252101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1179716 
End bp1180750 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content42% 
IMG OID644934661 
Producthypothetical protein 
Protein accessionYP_003091290 
Protein GI255530918 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAA AATCCGTATT CACCTTAGCC TTACTCAGCC TGGCCTCTGC TACTTTTGCG 
CAAGAGACCG CAGAAGCACC TTTGCAAATT TCAGGATCAG TAGATACCTA TTTTAAGTAT
GACTTTGCAA AAGCACCAAA TATCAAAACT TATTTTGCAA ACGAGCAGAA TTCGGTTTCG
ATAGGTATGA TCGATCTGGC TTTAAAAAAA ACCACAGGTA AGGCATCATT TGTTGGAGAA
CTGTCTTTTG GACCACGGGG ACAGGCCCAG TCAATTTTGC CTAGTGGGGA TGGTGAGTCA
TTTCACATTC AGAACCTGTA TGTAAACTAT GCTTTTACCG ATAAGTTTAC AATGACTGCT
GGTTATATGG GCACATTTAT TGGTTATGAA GTGATATCTC CGGTAGCCAA TTTCAATTAT
TCAACCTCTT ATCTTTTTGG TGCCGGCCCT TTTCAGAATG CTGGTATTAA AGGTACTTAT
GCGTTCTCTG ATAAAGTTAG CCTGATGCTG GGCTTGTTTA ATGACTGGAA TGCCTATCAG
GACCTAAATG GCGTATCTTC TGTAGGGGCA CAGCTAATGG TTTCTCCTGT TAAAGGCTGG
ACAGCTTATA TCAATGTATT GAACGGATAT CACTCAGCAG GCGGCTATGG ATCGGGAACC
ATTGTTGACC TGACCACGAC TTATCAGGTA ACAGACAAAT TTAAATTAGG TTTAAATGCG
GCCGACTATT CTGCATCTAA TGATAATGGT GGTTATACGG GTGCGGCTTT GTACCCACAA
TATGCATTTA CACCGGCCGT TTCCCTGGGT TTAAGGGGCG AGTATTTTAA CCTCAAAGGT
GTTGCAGGTG CTGCTGATGC AGGGATCATT TCAGGAACAT TATCTGCAAA TATCAAAGCA
GGTGGTTTAA CTTTTATTCC TGAAGTTCGT TTTGATAATG ATAAAGATTA TACGCAGTCT
TTCTTTAAAA GCGATGGTAT TACACCTACA AAGTCGGCTT CACAATTCTC GCTGGCTGCG
GTTTACGCAT TCTAG
 
Protein sequence
MKLKSVFTLA LLSLASATFA QETAEAPLQI SGSVDTYFKY DFAKAPNIKT YFANEQNSVS 
IGMIDLALKK TTGKASFVGE LSFGPRGQAQ SILPSGDGES FHIQNLYVNY AFTDKFTMTA
GYMGTFIGYE VISPVANFNY STSYLFGAGP FQNAGIKGTY AFSDKVSLML GLFNDWNAYQ
DLNGVSSVGA QLMVSPVKGW TAYINVLNGY HSAGGYGSGT IVDLTTTYQV TDKFKLGLNA
ADYSASNDNG GYTGAALYPQ YAFTPAVSLG LRGEYFNLKG VAGAADAGII SGTLSANIKA
GGLTFIPEVR FDNDKDYTQS FFKSDGITPT KSASQFSLAA VYAF