| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1005 |
|---|
| Symbol | |
|---|
| ID | 8252099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1176892 |
|---|
| End bp | 1177869 |
|---|
| Gene Length | 978 bp |
|---|
| Protein Length | 325 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644934659 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003091288 |
|---|
| Protein GI | 255530916 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1242] Predicted Fe-S oxidoreductase |
|---|
| TIGRFAM ID | [TIGR01212] radical SAM protein, TIGR01212 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAAAA AAAGAACAGC ATTGGGAACT CCGGTAGATT TAGGTATAAA AGGATATAAC
AATTACGGTA CGCACCTTAA AGAGAAATAC AAAGGACAGC GGGTATTTAA AGTAATTGTT
GACGGTGGCT TTACCTGTCC CAATCGGGAT GGCAGTAAAG GCTATGGTGG TTGTACCTAT
TGTAATGTAG ATTCTTTTAC ACCCGAACTT TCCCGTAAAC TCCCTACCGT TCGCGAACAG
CTGGAACAAG GCATGGAGCG CGGAAAGAAT TTTTATAAAG CCGATAAGTT TATTGTTTAT
TTTCAGCCAA ATACCAATAC TTATGCACCT GTACATTATT TAAAGATGAT GTACGATGAA
GCGCTTTCTA TAAATACTGC AGATGTGGTT GGGTTTTCTG TTGGTACAAG GCCGGATTGC
ATCGACGCTG AAAAAGTGGC CTTACTGGAA AGTTATGCTG ACCGTTTTGA TGTAGACCTG
GAAATGGGTA TGGAATCTAT ATATGATGAA ACTTTAAACC AGATCAACCG GGGCTGCAGT
CACGGAGAAT TTGTAGCTGC TGTTAAATTA CTTGAAAATT CTAAACTTGA TCTTTGTGTA
CATACCATTT TTGGTTTTCC CTGGGAAACC GAAGAAATGA TGTTGGGTTA TATTCATGAA
ATTAACCGCT TTCCGCAAAT TAAATTCGTA AAATTCCACC ATCTTCACAT TGTTGAAGGC
TCAATAATGG GTGTTAAATA TAAAAAACAA CCCTTTAAGC TGTTTTCACT AGAAGAATAT
ACCGATCTGT TGTGTAAGCT GATCCCTTTG CTGCGTCCGG ACATAGTCAT ACAACGGTTA
TTTGGCATTT CCGACTGGGA TTTATTGATT GCGCCCAATT GGGGCATGAA TAAGTCTGCC
ATACAGACTT ATATTGATAA AGAAATAGAA AAAAGAGGAG TTGTTCAGGG AAGTGCTTAT
TTTCCTGTTG CTATATAA
|
|---|
| Protein sequence | MQKKRTALGT PVDLGIKGYN NYGTHLKEKY KGQRVFKVIV DGGFTCPNRD GSKGYGGCTY
CNVDSFTPEL SRKLPTVREQ LEQGMERGKN FYKADKFIVY FQPNTNTYAP VHYLKMMYDE
ALSINTADVV GFSVGTRPDC IDAEKVALLE SYADRFDVDL EMGMESIYDE TLNQINRGCS
HGEFVAAVKL LENSKLDLCV HTIFGFPWET EEMMLGYIHE INRFPQIKFV KFHHLHIVEG
SIMGVKYKKQ PFKLFSLEEY TDLLCKLIPL LRPDIVIQRL FGISDWDLLI APNWGMNKSA
IQTYIDKEIE KRGVVQGSAY FPVAI
|
|---|
| |