| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_1000 |
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| Symbol | |
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| ID | 8252094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1169542 |
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| End bp | 1171242 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644934654 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003091283 |
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| Protein GI | 255530911 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTA GAAAGTCGAT TGACTTACTC ACTAAGGAAG CAGCTGAGAG CGGTGAGGGA
ACACTAAAAA GAACATTAGG GCCGGTAAAT CTGGTTGCCC TAGGTATTGG GGCTATTATT
GGTGCGGGAC TGTTCTCCAT CACCGGTTCT GCCGCAGCCA ACAATGCAGG CCCTGCCATC
ACAATTTCAT TCATTATTGC TGCCCTGGGA TGTGGCTTTG CAGGATTATG CTATGCAGAG
TTTGCTTCCA TGATACCGGT AGCCGGTAGT GCCTACACCT ATTCTTATGC CACCATGGGC
GAGTTTGTAG CCTGGGTAAT TGGTTGGGAT CTTGTGCTGG AATATGCACT GGGAGCCGCA
ACTGTTTCCA TTAGCTGGAG CAGATATCTG GTCAAGTTTC TGGCTTATTA CGATATACAT
CTGCCCGCAC AGGTCACTAT GTCGCCCTTT GAACATGCCA CCCTGCTTGA TGGTACCGTA
GTTTCCGGTA TGTTTAACCT GCCTGCAGTA TTCATCATTG TAATCATGTC TTTCGTACTG
ATCAGGGGAA CCAGTGAATC GGCATTTGTG AACGGCCTCA TTGTAGCCAT TAAAGTAGTG
ATCGTTTTCA TCTTTATCTT TTTGGGTTGG AAATACATCA ATGCGGATAA TTATTCGCCA
TATTTTATTC CGGCCGACAA GCCTGGCCAC GAAAGCGTGT TTACACACGG CTGGGGAGGG
GTAATCCGGG CCGCAGGAAT TGTATTTTTT GCTTACATAG GCTTTGATGC TGTTTCTACA
GCTGCACAGG AAGCTAAAAA TCCCAAGAAA GATATGCCCA TCGGCATTCT GGTTTCTTTG
TTTATCTGTA CCATATTGTA TATCCTTTTT GCACACGTAA TGACAGGAGT TGCCAATTAC
GATATGTTTA AAGGTCAGGA TGGAATTGCC CCTGTTGCTG TTGCTATTGA CAATATGGGG
ACAAAAGATG CAGCCGGCAT AGTAACACCC GCCTATCCAT GGTTAAACAA ACTGATCATT
CTGGCCATTT TAGGTGGTTA CGCCTCAGTA ATCCTGGTCA TGTTACTTGG ACAATCGAGG
GTATTTTTCT CGATGAGCAA GGATGGTCTG TTACCTAAAG TTTTCTCTAA AGTACATCAT
AAATATAGCA CACCTGCCAA AAGCAATTTA CTGTTTATGG TATTTGTAAG TTTATTTGCC
GCCTTTGTGC CTGCCACTGT AGTTGGTGAA ATGACCAGTA TAGGTACCCT GCTGGCCTTT
ATTCTGGTAT GCATTGGTGT AGTTATCTTA AGGAAACGTA TGCCGGATTT GCCAAGGGCA
TTTAAAGTGC CTATGGTTCC GTTAATCCCT ATATTGGGTA TAGCCGTTTG TTTGGGCATG
ATGGTATTTT TACCGCTTGA TACCTGGGTA CGCTTATTGG TATGGATGAT CATCGGTATT
AATGTTTATC TTTTTTATGG AATGAGAAAC AGCCTGCTTT CGGATAACAA CCAGCTTACA
CTGGCTAAAA GCACCAAAAC CGTTTCTTAT ATAGGTTTTG CATTGGCCAT ACTGCTGATC
ATCGTAGCCA TTATACACCA TCACATTACA GATGGGGCTG ATACAGGGTT GTATTATTTC
TCATTGGTTT TCGCTGCTGC ACACTTAATC CTTTATGTGG TTAAGGCAGC TACTTCCGGA
CAGGTGAAAG CTAAACAATA A
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| Protein sequence | MNFRKSIDLL TKEAAESGEG TLKRTLGPVN LVALGIGAII GAGLFSITGS AAANNAGPAI
TISFIIAALG CGFAGLCYAE FASMIPVAGS AYTYSYATMG EFVAWVIGWD LVLEYALGAA
TVSISWSRYL VKFLAYYDIH LPAQVTMSPF EHATLLDGTV VSGMFNLPAV FIIVIMSFVL
IRGTSESAFV NGLIVAIKVV IVFIFIFLGW KYINADNYSP YFIPADKPGH ESVFTHGWGG
VIRAAGIVFF AYIGFDAVST AAQEAKNPKK DMPIGILVSL FICTILYILF AHVMTGVANY
DMFKGQDGIA PVAVAIDNMG TKDAAGIVTP AYPWLNKLII LAILGGYASV ILVMLLGQSR
VFFSMSKDGL LPKVFSKVHH KYSTPAKSNL LFMVFVSLFA AFVPATVVGE MTSIGTLLAF
ILVCIGVVIL RKRMPDLPRA FKVPMVPLIP ILGIAVCLGM MVFLPLDTWV RLLVWMIIGI
NVYLFYGMRN SLLSDNNQLT LAKSTKTVSY IGFALAILLI IVAIIHHHIT DGADTGLYYF
SLVFAAAHLI LYVVKAATSG QVKAKQ
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