| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0997 |
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| Symbol | |
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| ID | 8252091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1164546 |
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| End bp | 1167485 |
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| Gene Length | 2940 bp |
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| Protein Length | 979 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934651 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003091280 |
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| Protein GI | 255530908 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTAA TCTTCAGAAA CTGGATTGCG CTTGTCTTGT TGTTTTGTAT TGCTGCTGTT
GTACCTGCTT TTTCGCAGGA AAAGCTAGTG CGTGGGAAAG TAACGGATCA AAAAGATAAG
GGTGTATTGC CCGGTGTAAC TGTGGCGGTA AAAGGAACCA CTAAACGTGC CGCTACAGAC
CCTAACGGTG ACTATCAGAT TAGTGCGGGG GCAAATGATG TTCTTATATT TAGTTTTATC
GGTTATGGAA CTAAAGAGGT AAATGTGAAC ACGGCAGCGG GCAGCGTACT AAACGTAGCG
CTCTCGTCAG GCACAAACGA GCTTGACGAA CTGGTGGTTG TGGGCTATGG TACACAAAAA
CGCAAAGATG TGACCGGGGC CGTTGCCTCA GTAGATAAGA GCAGACTTGA CCAACTGCCT
AATACTAATT TTGCCCAGGC CCTGCAAGGT GCCCTGCCAG GCGTAAGTGT TGATCAGAAC
AGTGGTGGTG CTGAGGGTAA CAATAATTCC ATAGTGATCA GAGGTAAGAA TTCCATTACG
GCCACCAATG ATCCGCTTAT TATATTGGAT GGTATTCCCT ATAATGGCAG CATATCTGAC
ATTAACCCTC CTGATATCGA GTCTATTGAT ATTTTAAAGG ATGCTTCAGC ATCAGCCATA
TATGGTTCCA GAGGATCTAA TGGTGTTATT CTGATCACCA CAAAAAAGGG GAGTAAAGGT
AAAGCCGTTA TTTCCTATGA TGGCTTTTAC GGACTGCAGT CTTTTGCCAA CCTGCCGGAT
ATGCTGAGCC CTGAAGAATT TTATGCTTTT AAACGTACAC GTGAACCTAA TACTGCCATT
ACAACCTCAG AGCAGGCTGT ATACGATTCA AAAGTTTTCC CCGACTGGGT TGATCTGGCA
ACCAGGATGG GTAGTCGTAC CCAGCATACA CTTGGTGTGA GCGGAGGAGG TGAAAATTCG
AAGTATTACG TTTCTGCCAC CTATTTAGGT GTTAAGGGTA TTGCCCTAAA TGACGATTTT
AAAAGAATGT CTACCCGGGT AAACCTGGAA ATGAATGTAA CCAAGTGGCT TACCTATGGC
ACCAATACCC AATTGTCTTA CAACAATAGA AGTGGGTTGG CGGCTTCCTT TACAGGAGAC
TATGGTGCAT ACCGCTTTAA CCCGCTTACC ACTGCATATG ATGCCAGCGG AAACCTTACG
GTTTATCCAT GGCCGGATGA TGTTTTCTTT GCCAACCCCC TGGCAACAAC ATTGGCAAGT
AATGATGATG AAACCTATAA GGTAGTCAGC ACCAATTACC TGAATGTACA ATTGCCTTTT
GTAAAAGGGC TTTCTTATCG GTTAAATACA GGCGTTGAAT ACACCAATCG TGATCAGCGT
ACTTATTATG GCAGAAATAC ACGGACAGGT TTGAAAGATA ACGGCAACCT GAGTCTTGGG
CAAACGCTGC AGAGAAACCT GCTCATAGAA AATATATTAA ATTACAACAA TACTTTTGGC
AAACATTCCA TTAGCTTCAC CGGCTTATAC AGCTATCAAT ATGACAACAT AAAGGGCAAT
AGCTTAGACG CAACTGGTTT TCCTAATGAT GTGTTAACCT ATTACCAGGC TAATGTTGCC
CTCTCTAAAA CACCTGGTGC CTCTTATTCA AAGCAAACAC TGGTATCTCA GATGGGCCGT
ATCAATTACA CTTTCAATAA CAAATACCTT TTAACGCTAA CCGGTCGCAG GGATGGTTTT
TCGGGTTTTG GGGCCAACAA AAAATATGGA TTTTTCCCTT CAGTAGCGCT TGGCTGGAAT
TTATCAGAAG AACAATTTCT CAGGAATGTA GAGACCATCT CCAATCTCAA ATTCAGACTT
TCTTACGGCA GCAACGGAAA CCAGGCTGTA GGTACTTATC GTACACTGGC AAAATTATCA
GAAAGATCTT ATGTAAATGG ATCTGCAACA GCACCAGGTT ATATTCCTAC CAGTCTGGCC
AATCCGGATC TTGGATGGGA AACAACCAAT AGCCTTAATG CGGGTATTGA TTTTGGCTTG
TTCAAAGGCC GGTTAACAGG CTCAATTGAT GCTTACCTAT CTAAAACACA TGACCTGCTG
CTAAAGCGGC AAATCTCTCC TGTGCATGGT GTGGATACCA TTACCCAAAA TATTGGGAAA
ACAGCTAACA GAGGGATTGA ACTAGGCCTT AACAGCATCA ACATTAAGTC TGCAGATTTT
AGCTGGACCA CTACTGCCAA TATTTCGCTT AACCGGAATA AAATAGAAGA ACTATACGGC
AATGGCAAAA ATGACACTTT AAATACCTGG TTTCTTGGCA AGCCGATTGA TGTGAACTTC
GATTATATTT ACGGGGGAGT CTGGCAGGTA GGGGAAGACT TTAGCAAGTC GCCCCAGCCC
AATACCAAGG CCGGGTATGC CAAAGTAGTG GATTACAATA ATGACGGTAA GATTGATGCA
AGGGATAAGA CCATTATTGG AAGCCGGCAG CCAGATTTCA GCTGGGGAAT GGGTAATAAT
TTTACCTATA AGAACTTTTC ACTCTATGTA TTTGCACAGG GGGTAGTGGG TACAAACAGG
AGAAATACTT TTTTGGCAGA CAATGTAAAT TCTGGTGTAC GGTATAACAC CATGCGTAAA
AACTGGTGGA CGCCCGACAA CCCTACCAAC GAATATTATG CAAACGACGT TAACGCGAAC
ATATATGGTG TTCCCATTTT TCAAAGCGAC AGCTATTTGA GGGTTAAAGA CATTTCATTG
TCCTATAACC TTTCTGCCAG GATGCTGGAG AGACTTAAGC TGGGCAGGTT TAAGGTGTAT
CTTAATATGC GGAACCTGTT TACGATAACC AAATGGACCG GCCTGGACCC AGAATTGAAT
ACCCAGGATG CCATTCCGCT ACAAAAAGAA TTTATACTGG GTTTAAATAT TGGCTTATAG
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| Protein sequence | MKLIFRNWIA LVLLFCIAAV VPAFSQEKLV RGKVTDQKDK GVLPGVTVAV KGTTKRAATD
PNGDYQISAG ANDVLIFSFI GYGTKEVNVN TAAGSVLNVA LSSGTNELDE LVVVGYGTQK
RKDVTGAVAS VDKSRLDQLP NTNFAQALQG ALPGVSVDQN SGGAEGNNNS IVIRGKNSIT
ATNDPLIILD GIPYNGSISD INPPDIESID ILKDASASAI YGSRGSNGVI LITTKKGSKG
KAVISYDGFY GLQSFANLPD MLSPEEFYAF KRTREPNTAI TTSEQAVYDS KVFPDWVDLA
TRMGSRTQHT LGVSGGGENS KYYVSATYLG VKGIALNDDF KRMSTRVNLE MNVTKWLTYG
TNTQLSYNNR SGLAASFTGD YGAYRFNPLT TAYDASGNLT VYPWPDDVFF ANPLATTLAS
NDDETYKVVS TNYLNVQLPF VKGLSYRLNT GVEYTNRDQR TYYGRNTRTG LKDNGNLSLG
QTLQRNLLIE NILNYNNTFG KHSISFTGLY SYQYDNIKGN SLDATGFPND VLTYYQANVA
LSKTPGASYS KQTLVSQMGR INYTFNNKYL LTLTGRRDGF SGFGANKKYG FFPSVALGWN
LSEEQFLRNV ETISNLKFRL SYGSNGNQAV GTYRTLAKLS ERSYVNGSAT APGYIPTSLA
NPDLGWETTN SLNAGIDFGL FKGRLTGSID AYLSKTHDLL LKRQISPVHG VDTITQNIGK
TANRGIELGL NSINIKSADF SWTTTANISL NRNKIEELYG NGKNDTLNTW FLGKPIDVNF
DYIYGGVWQV GEDFSKSPQP NTKAGYAKVV DYNNDGKIDA RDKTIIGSRQ PDFSWGMGNN
FTYKNFSLYV FAQGVVGTNR RNTFLADNVN SGVRYNTMRK NWWTPDNPTN EYYANDVNAN
IYGVPIFQSD SYLRVKDISL SYNLSARMLE RLKLGRFKVY LNMRNLFTIT KWTGLDPELN
TQDAIPLQKE FILGLNIGL
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