| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0965 |
|---|
| Symbol | |
|---|
| ID | 8252059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1132333 |
|---|
| End bp | 1132647 |
|---|
| Gene Length | 315 bp |
|---|
| Protein Length | 104 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644934620 |
|---|
| Product | L-rhamnose 1-epimerase |
|---|
| Protein accession | YP_003091249 |
|---|
| Protein GI | 255530877 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3254] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02625] L-rhamnose 1-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGA TTGCATTTAA GATGAAACTT TTACCTGGTG TTAAAGCAGA ATACAGAAAA
CGGCATGATG AGATCTGGCC GGAGTTGATT GAACTGCTAA AAAGTAAGGG CGTCAGTGAT
TATTCTATCT TTTTTGACGA AGAATCAGAT ACGCTTTTTG GGGTTCAAAA GACCGCTGGT
ACGGGCTCTT CACAGGATTT AGGAACTGCA TCGATAATGC AGCAATGGTG GAAATACATG
TCTGACATTA TGTATACCAA TCCCGACTAT TCCCCCGTCA CCACCCCCCT TGAGAAATTA
TTTGAAATGG AATAA
|
|---|
| Protein sequence | MEKIAFKMKL LPGVKAEYRK RHDEIWPELI ELLKSKGVSD YSIFFDEESD TLFGVQKTAG
TGSSQDLGTA SIMQQWWKYM SDIMYTNPDY SPVTTPLEKL FEME
|
|---|
| |