| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0960 |
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| Symbol | |
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| ID | 8252054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1123431 |
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| End bp | 1124648 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934615 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003091244 |
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| Protein GI | 255530872 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1331] Highly conserved protein containing a thioredoxin domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.155523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAAATA AATTAAATAT TGCCTGCTGT TTAGCCTCCT TTTTATGTTT TTTTTTTGCC
GCAGACTTAC AGGCGCAAAA ACGCAAAACA CTTAAAGCTG ATCCTGAAAT TTTAAAGATC
ACAGATTCGG CCTTATCGCG TTCAGCGGGC CAATACCTGC AGTTGATGGA AACTGTTCCT
GATACCTTGT TTCCCAGGAC CTTTCAAAAC AACAGGCTGT TAACAGCCAC TTCTCCCAGT
TGGATCAGCG GTTTTTATCC GGGTACGCTA TTGCTGTTAT ACGAATTCAA CAATAGCAAT
AAGTTTAAGG AGGAAGCTTT GAAAAAGCTT AAAGTATTGA AAAAGGAACA GTTCAATACC
GGAACACATG ACTTGGGGTT CATGATGTAT TGTAGTTTTG GAACTGCAAA AAGATTGTTT
AAAACCAAAG CATATGATCC TGTTCTGTTG AACAGCGCTG CATCATTATC TCAGCGATTC
CATGATGAAG TAGGGTTGAT CCGGTCCTGG GACCATAAGC CTGAAAAATG GAAATACCCG
GTGATTATTG ACAATATGAT GAATCTTGAG TTGCTTACCT GGGCCAGTCG TTTGTCAGGT
AATCAAAGGT TTTATAACAT TGCAAAACAA CATGCCGACC TGACCATTAA AAATCATTTC
AGGCCAGATT ATAGTTCCTA TCATGTTATA GATTATGATC CTAAAACTGG TAAAGTATTA
AACAAGCTTA CAGAGCAGGG CTATAGTGAT GAATCGGCAT GGGCCAGGGG GCAGGCATGG
GCCCTGTATG GTTATACGAT GATGTACAGG GAAACCGGAG ATGCAAAATA TTTGGAAATG
GCCATGCACA TTGCGGATTA TATTTTGAAG CATCCGAACC TGCCTGCAGA TAAAATTCCT
TACTGGGATT TTAATGCGCC TGACCAATCC GCTGCGCCCA GAGATGCTTC TGCTGCTGCT
GTAATGAGTT CTGCATTGAT AGAATTGAGC GGATTTAGCA AAGGAGATAA GGGCAAGGTT
TACTTAAAAA CGGCCGAAGC TATGCTCAGG CAGCTGTCGT CACCAGAATA TCTTGCTCAG
CCAGGTACAA ATGGAGGTTT CATTTTAAAG CATAGTGTCG GTTTTTTACC GGCAGGCAGT
GAAGTGGATG TGCCATTAAG CTATGCTGAT TATTATTATG TAGAGGCTAT GCTAAGGTAT
CGTACACTTA AAAAATGA
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| Protein sequence | MVNKLNIACC LASFLCFFFA ADLQAQKRKT LKADPEILKI TDSALSRSAG QYLQLMETVP
DTLFPRTFQN NRLLTATSPS WISGFYPGTL LLLYEFNNSN KFKEEALKKL KVLKKEQFNT
GTHDLGFMMY CSFGTAKRLF KTKAYDPVLL NSAASLSQRF HDEVGLIRSW DHKPEKWKYP
VIIDNMMNLE LLTWASRLSG NQRFYNIAKQ HADLTIKNHF RPDYSSYHVI DYDPKTGKVL
NKLTEQGYSD ESAWARGQAW ALYGYTMMYR ETGDAKYLEM AMHIADYILK HPNLPADKIP
YWDFNAPDQS AAPRDASAAA VMSSALIELS GFSKGDKGKV YLKTAEAMLR QLSSPEYLAQ
PGTNGGFILK HSVGFLPAGS EVDVPLSYAD YYYVEAMLRY RTLKK
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