| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0954 |
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| Symbol | |
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| ID | 8252048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1113267 |
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| End bp | 1113860 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644934609 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003091238 |
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| Protein GI | 255530866 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATCAAAGATT ATACTACATT AAGCGATGCT GATTTAATCC TTTCCTGGAA AGAAGGCGAT
GAACAGGCAT TCTCTAATCT TTACAAAATG TACGTCATGC CACTGATGAG GCTGGCCGTT
TCGAAAACCA ACAGCAGGGA AATAGCTGAA GAACTAGTCC AGAACTCATT TGTAAAATTA
TATGAGCATA AAAGGTCTAT TGAAACCAAT ACCTCCATCC AGGCCTATTT ATTTGTAATC
CTTAAAAACC AGATCCTTAA CCACTACCGG AGTCAGCTGG TACGAAATAA ATATGAGCTG
CATATAGCAA AGCATGCGAA TGCTGAAGAT CATTCACTCA TCGAACAGAT CGAAAGCCGC
GAGCTGGCTG CGCTGATCAA TATGGAAATT GAAAAGCTGC CCCCAAAATG CCGGGAAGTA
TTCATCTTAA GCAGAAAAGG ATTTTTATCC AATAAAGAGA TCGCAGCAAA ACTTGATATT
TCAGAAAATA CGGTAGAACA ACACATCAGA AAAGCTATCA GTAAACTCAG AATGTCCCTC
GGACAACTCA TAGAGCTGGG TGTGGTCATT TATGTTTGCA TTATGCTCCG TTAA
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| Protein sequence | MKDYTTLSDA DLILSWKEGD EQAFSNLYKM YVMPLMRLAV SKTNSREIAE ELVQNSFVKL
YEHKRSIETN TSIQAYLFVI LKNQILNHYR SQLVRNKYEL HIAKHANAED HSLIEQIESR
ELAALINMEI EKLPPKCREV FILSRKGFLS NKEIAAKLDI SENTVEQHIR KAISKLRMSL
GQLIELGVVI YVCIMLR
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