Gene Phep_0953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0953 
Symbol 
ID8252047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1111813 
End bp1113228 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content44% 
IMG OID644934608 
Producthypothetical protein 
Protein accessionYP_003091237 
Protein GI255530865 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.346417 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTTA CATTATCATT GTTGATAACT ATAATAGTCA GTTTAAAGCC TGTTTTTGCG 
CAAAATGATG ATGTCATTCT GGTGGATCAA AATGCCCTGA CTTGTTTTAA AGGAACGTAT
GGTAACAACA TTAACGGGCA AAGCTTTCAG CAGGATGCAC TAACCAGTTA TAAGGGATGG
CAATACATTG CCTATTACAA TGCCGAGCGC CGGATTTGCC TGGGAAGACG GAAGCTGAGG
AGTTCTGAAT GGGAAATTCT CAGTTTTAAT GATTACCGTT TTTCTTATGC TAAAAACCAG
GATAACAATA CACACAACGT GATCAGTATT GGACTTTGTG CAAAAGACGG GACCATACAT
CTTTCTTTTG ACCAGCATGC AGGGCCACTG CACTATCGTG TTTCAGTGAA GGGGATTCTG
GATAATCCCG AACGCTTTAA ATGGACCAGT AAACTTTTTA ACCCTGTAGC AGACTGGCTG
GAAAACGGAA AGCCCATACC TGTAGTTTCG TATCCAACTT TTATCAGTAC CCCGGATGGC
AATCTTTTGT TTGCATACAG AAACGGGTAT AGCAGTAATG GAGATTGTCT GATTGGGCAG
TATGATGCTT CATCTGGTAC CTGGACTAAC CCGCATGTAT TTATTTCACG GAGTGGTGTT
TACGGCGATC CCTTTAAGGG GGAGAGTCAT AATAGAAATG CGTACCTCAA TAACCTGAGT
TATGACCGGA AAGGCATGCT GCACATCAGC TGGACCTGGC GGGAAAGCGT TGCAACGTTG
GGTAACCGCG ATATCTGTTA TGCCTATAGC AAGGATAATG GCAAATCATG GTTTAATAAA
AAAAATGATC AGATAGCGGT TCGTGGTACC GCTGAGCCCG AAGCTATCAA TACATTAAGT
GCCGGAATTA CCGTGCGGCA TCTGGATCGG GGCTGGGGAA TTATGAACCA GCAATCGCAG
GTGATCGACA ACAATCTGAA CCCGCATATC GTAATGTACC ATAAGAAAAA TCATGGAAAC
CCCGGTTGGG CAGTAATGGA AAACGGGGCC TATTTCCATT ATTATCTGAA GGATGGTCAA
TGGCAACAAA CCCAATTACC CTTTATGGGT AACAGACCTA AGCTGATAGT TGACCGGAAC
AATAATTTAT ACCTCGTTTT TATGCGTAAA GATCATTTTG ATGTGAAAGA CCAGGGGGCA
CCACTGGTTG TGGTAAAAGC AACTTACAAA TCGGGATGGC AGGACTGGAA GGAAGTGTAT
GTATCAAAAT CGGGTTATTT CAATGAGCCC CAGCTTGACC TGGCAAGATG GCATAAGGCA
GGTATTTTGT CTGTAATGGT CCAATTGCCA CCTGCCACCG AAGGCCAGGC CTCAGCGCTT
CAGGTGCTCG AAATGAGCGT CAAGCATTTG AAGTAG
 
Protein sequence
MKFTLSLLIT IIVSLKPVFA QNDDVILVDQ NALTCFKGTY GNNINGQSFQ QDALTSYKGW 
QYIAYYNAER RICLGRRKLR SSEWEILSFN DYRFSYAKNQ DNNTHNVISI GLCAKDGTIH
LSFDQHAGPL HYRVSVKGIL DNPERFKWTS KLFNPVADWL ENGKPIPVVS YPTFISTPDG
NLLFAYRNGY SSNGDCLIGQ YDASSGTWTN PHVFISRSGV YGDPFKGESH NRNAYLNNLS
YDRKGMLHIS WTWRESVATL GNRDICYAYS KDNGKSWFNK KNDQIAVRGT AEPEAINTLS
AGITVRHLDR GWGIMNQQSQ VIDNNLNPHI VMYHKKNHGN PGWAVMENGA YFHYYLKDGQ
WQQTQLPFMG NRPKLIVDRN NNLYLVFMRK DHFDVKDQGA PLVVVKATYK SGWQDWKEVY
VSKSGYFNEP QLDLARWHKA GILSVMVQLP PATEGQASAL QVLEMSVKHL K