Gene Phep_0949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0949 
Symbol 
ID8252043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1103844 
End bp1104962 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content43% 
IMG OID644934604 
ProductFecR protein 
Protein accessionYP_003091233 
Protein GI255530861 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.416885 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.208289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC AGAAAGCCAA AGAACTCTTA GAGCGCTATA ACAGTGGTTT GCTATCCCCT 
GCCGAAAAGC AGCAGTTGGA TCTGTGGTAT TTGGAGCAGG CCCGAAAGAG CAAGCTGGAA
TTGACAGAGG AAGAACTGTT GGATAGTGTG CAGCATTTAA GCAGTAAGTT ACCACTTGTT
CAGCCAAGGA CAAGAAGGTT ATGGCCTCGC ATTGCTGCGG CTGCTTCGAT TGTATTGGTA
TTGGGTTCTG CTGTTTATTT TTATAACGGC AGGAATGAGA AGGCTGGTAG TGCTGAAGTG
CTTGCCAATG ATGTGGCGCC TGGAAAAAAT GGTGCAACAT TAACTTTGGC CAATGGGCAG
AAGATTTTGA TCAATGATGC ATTGGCAGGA AATATCGCCA CACAATCGGG CGTAAAAATT
TCTAAGACTG CAGATGGCCA GATTGTATAC GAAATTACGG ATAATGGTGC TAATAATTCA
GAATACAACC TACTGTCTAC TACACGGGGG CAACAGACAC AGGTGCGTTT GCCTGACGGA
ACCCTCGTGT TTTTAAATGC TGAATCTTCA TTAAAATATC CAACAAGCTT TACAGGTTCA
GGGAAGCGTC AGGTTTCCTT AACTGGGGAA GGATATTTTG AAGTTGCCAA GGATAAAAAG
CATCCATTTA TCGTTGAAAG CTCGAACCAA AAGGTTGAGG TGCTTGGAAC GCATTTCAAT
ATCAACAGTT ATGCCGATGA ACCTGAGGTT AAGACGACCC TGCTCGAAGG TTCGGTAAAT
GTCTTTAATT TAAAAGGTAA ATATTCAAAA GTATTAAGCC CAGGTCAACA GGCAATAGTA
AAGGGCGAAG ATATAAAAGT TGGTGATGCC GATATCGATC AAGCCATGAG CTGGAAAAAT
GGCGACTTCG TTTTTGTCGG AGAGGACCTG AAAGCGGTGA TGCGTCAGGT TGCCAGGTGG
TATGATGTAG AGATCGGGTA TCAAGGTAAT ATAAATTCTT CTGGTGTAGT CAGTACAATT
TCCCGTGATA AGAAATTATC ACAGGTATTA AAAGCCCTAC AGATCAATCA GGGAATCCAT
TTCAAAATTG AGGGAAGGAG GGTTTTGGTT ATGCCTTAG
 
Protein sequence
MNEQKAKELL ERYNSGLLSP AEKQQLDLWY LEQARKSKLE LTEEELLDSV QHLSSKLPLV 
QPRTRRLWPR IAAAASIVLV LGSAVYFYNG RNEKAGSAEV LANDVAPGKN GATLTLANGQ
KILINDALAG NIATQSGVKI SKTADGQIVY EITDNGANNS EYNLLSTTRG QQTQVRLPDG
TLVFLNAESS LKYPTSFTGS GKRQVSLTGE GYFEVAKDKK HPFIVESSNQ KVEVLGTHFN
INSYADEPEV KTTLLEGSVN VFNLKGKYSK VLSPGQQAIV KGEDIKVGDA DIDQAMSWKN
GDFVFVGEDL KAVMRQVARW YDVEIGYQGN INSSGVVSTI SRDKKLSQVL KALQINQGIH
FKIEGRRVLV MP