Gene Phep_0947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0947 
Symbol 
ID8252041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1102490 
End bp1103032 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content42% 
IMG OID644934602 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_003091231 
Protein GI255530859 
COG category[R] General function prediction only 
COG ID[COG0431] Predicted flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.787165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0766584 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATTA AAATAGCTGC ATTTTCAGGA AGTTTGAGAA AAGACTCTTA TACCACCAAG 
CTGATAAAAG CCTTTAAACA TTTGTCTCCA GACGGGGTAA CGGTAGAAAT TATAGATATC
AGCCAGCTGC CTCTATTAAA CCAGGACCTG GAAGCCGATT TACCCACCGC TGTTAGAGAT
CTTCACCAAA GTATTGAAAA TGCAGATGCC ATCATACTCG CAACACCAGA ATACAACAGA
TCTTACTCGC CTGTTCTAAA AAATGCTTTA GACTGGGGCT CAAGACCACA GGGACAAAAT
AAATGGGACA AAAAGCCGGC TGTTGTTTTA GGATGCACTC CCTATAACCT CGGCGCTTTC
GGAGCAGTGC AGCACTTACG CCAGGTATTG GTATATCTCA ATATGCAACC TGTACAGCAA
CCGGAATTTT ACCTGGCAGG AGCTGCCGAT AAATTTGACG GGCAGGGAAA CCTGATCGAT
GAACAAACAA AAAAATTGAT AACTGACCTT TGGAATAAAT TTATGGACCT GATCAATAAA
TAG
 
Protein sequence
MSIKIAAFSG SLRKDSYTTK LIKAFKHLSP DGVTVEIIDI SQLPLLNQDL EADLPTAVRD 
LHQSIENADA IILATPEYNR SYSPVLKNAL DWGSRPQGQN KWDKKPAVVL GCTPYNLGAF
GAVQHLRQVL VYLNMQPVQQ PEFYLAGAAD KFDGQGNLID EQTKKLITDL WNKFMDLINK