Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0947 |
Symbol | |
ID | 8252041 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1102490 |
End bp | 1103032 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644934602 |
Product | NAD(P)H dehydrogenase (quinone) |
Protein accession | YP_003091231 |
Protein GI | 255530859 |
COG category | [R] General function prediction only |
COG ID | [COG0431] Predicted flavoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.787165 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.0766584 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTA AAATAGCTGC ATTTTCAGGA AGTTTGAGAA AAGACTCTTA TACCACCAAG CTGATAAAAG CCTTTAAACA TTTGTCTCCA GACGGGGTAA CGGTAGAAAT TATAGATATC AGCCAGCTGC CTCTATTAAA CCAGGACCTG GAAGCCGATT TACCCACCGC TGTTAGAGAT CTTCACCAAA GTATTGAAAA TGCAGATGCC ATCATACTCG CAACACCAGA ATACAACAGA TCTTACTCGC CTGTTCTAAA AAATGCTTTA GACTGGGGCT CAAGACCACA GGGACAAAAT AAATGGGACA AAAAGCCGGC TGTTGTTTTA GGATGCACTC CCTATAACCT CGGCGCTTTC GGAGCAGTGC AGCACTTACG CCAGGTATTG GTATATCTCA ATATGCAACC TGTACAGCAA CCGGAATTTT ACCTGGCAGG AGCTGCCGAT AAATTTGACG GGCAGGGAAA CCTGATCGAT GAACAAACAA AAAAATTGAT AACTGACCTT TGGAATAAAT TTATGGACCT GATCAATAAA TAG
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Protein sequence | MSIKIAAFSG SLRKDSYTTK LIKAFKHLSP DGVTVEIIDI SQLPLLNQDL EADLPTAVRD LHQSIENADA IILATPEYNR SYSPVLKNAL DWGSRPQGQN KWDKKPAVVL GCTPYNLGAF GAVQHLRQVL VYLNMQPVQQ PEFYLAGAAD KFDGQGNLID EQTKKLITDL WNKFMDLINK
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