| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0944 |
|---|
| Symbol | |
|---|
| ID | 8252038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 1100161 |
|---|
| End bp | 1100787 |
|---|
| Gene Length | 627 bp |
|---|
| Protein Length | 208 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644934599 |
|---|
| Product | Methyltransferase type 11 |
|---|
| Protein accession | YP_003091228 |
|---|
| Protein GI | 255530856 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00891342 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGAGG AAACCGAAAA ACCAGAATTT TGGGAATCAG CCTTTGGCGA AAAAAAGGAA
ATGTGGGGCT TTGAACCCGC AAAGTCTGCT GTATTAACAA AAGATTTTTT TGTCCAAAAC
TCAGTGAAAA GTATCCTGAT ACCTGGAATC GGTTACGGGA GGAATGCACA AATTTTCAAA
GAGAACGGAA TGGCTGTAAC CGGGATTGAG ATTTCAAAAA CTGCCATTGA AATGGCCGAA
AAACATTACG GAAACGATAT GGTTATCTAT CATGGTTCTG TAAACGACAT GCCATTTGAT
ACCTGTCAGT ATGATGGGAT ATTTTGCTAT GCTTTAATTC ATTTGCTGGA TAGCAGTGAA
AGGGAAAAAC TCATTCTGGA CTGTTATAAT CAATTGTCAG TACATGGCTA TATGGTCTTT
ACGGTTATTT CAAAAGCAGC GCATACTTAT AGGCAAGGCA AATTTGTTAG TAAGGATCGC
TACGAAATAT TTGATGGCGT TAAAATGTTC TTTTATGACA GGGATTCCAT AAAATCAGAA
TTTGACAAAG CCGGATTATT TGAGATTACA GAAATCAATG AGCATCAGCC ATTCTTTTTA
ATTAAATGCC AAAAAGGGAA ATCTTAA
|
|---|
| Protein sequence | MKEETEKPEF WESAFGEKKE MWGFEPAKSA VLTKDFFVQN SVKSILIPGI GYGRNAQIFK
ENGMAVTGIE ISKTAIEMAE KHYGNDMVIY HGSVNDMPFD TCQYDGIFCY ALIHLLDSSE
REKLILDCYN QLSVHGYMVF TVISKAAHTY RQGKFVSKDR YEIFDGVKMF FYDRDSIKSE
FDKAGLFEIT EINEHQPFFL IKCQKGKS
|
|---|
| |