| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0942 |
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| Symbol | |
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| ID | 8252036 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1096353 |
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| End bp | 1099235 |
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| Gene Length | 2883 bp |
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| Protein Length | 960 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644934597 |
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| Product | glycoside hydrolase family 2 sugar binding |
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| Protein accession | YP_003091226 |
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| Protein GI | 255530854 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000970619 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGAATTA TAGTAAAAAC TATTATCCTT TTATTTTTTG CACTTCCGGT TTGCGGGCAG
AACCCGAAAA GTGTATTGCC AAAAGAAACG AATGTTATAG TTGATGCAGA ATTTCAGCGA
CCCGGTAGTA CGTATGGTAC GCGTTGTTGG TGGTGGTGGT TAAACGGCAA TGTAACGCAG
CAGTCTATTA CCCGCGACCT GGAGGAGATG AAGGCAAAGG GCTTTAGCGG TGCCTGTATT
TTTGATGCTG GCGGAGCCAA CCAGGTTGGG AACAGACAGG TGCCCGAAGG GCCTATGTTT
GGCAGCCCGG ATTGGCGGGC ACTTTATCTG TATGCCATTC GCGAAGCCAA GCGCCTGGGC
CTGGTGATGT CTATGAACAT CCAGAGTGGC TGGAATCTTG GCGGCCCTGA TGTTAGCCCG
GAAGAGGCAG CTAAACAGGT TACATTTTCG GAACTGGGCA TTAAAGGGGG AACAAAGATT
AACCAAAAAT TAGTGCTGCC AGCAATAAGG GACGATTACT ATAAAGAAAT TGCGGTGCTC
GCCTTTCCAG ATAAAAACAA AGCACATGCA CCTATACATG ATTTGGAGAA CAAAACTGCT
TCCAAAGAAG CCGGAGGCTC TGTTCCCGAT ACCCGGCCAT TTTTAACAGA CATTGCCGGG
GTGCCTGGTG AGGAAGATGC CCTGAGCAAA CAAGTACTCA ATATCAGTAA GTATTTTAAG
GATGGGGTAT TGAATTGGGA CGCGCCTGCT GGCAACTGGA AGGTGATCCG CATAGGGTAT
ACCACTACAG ATGCCCGGAC TTCAACTACC AGCGGGAAAT GGGATGGCAG GGTACTTGAT
TTTTTGAGTG AAAAGTCATT TAACCGGTAC TGGGACACGC ATGTGGAGCC GCTGCTGCGC
CTGATTGGCC CTATGGCAGG TACAACCTTG CGTTATCTGC AAACGGACAG TTTTGAAGGT
GGGGGGATGA ACTGGACGGA TGGCTTTGCC GATGAATTCA AGAAAAGGAG AGGCTATGAC
CTGACCCTCT TTTTACCGGT ACTGACTGGT AAAATAATTG AAAGCCGTTC TGTAAGTGTG
CGTTTTCTGA ACGATTTCCG TAAAACAATA GGAGACCTGG TTTCAGAAAA ACATTACGGT
ACTTTCGCAA AAAGATCCAG AGCCCATGGA ATAGGTATTT TACCAGAGTC TGCAGGACCA
CACGCAGGTC CTTTTGACGG GCTTAAGAAC TACAGCCACA GTGAGGTGAT GATGAGTGAA
TTCTGGTCGC CCAGCCCTCA CCGTCCGCGG CCGATAGACC GTTTTTTTGT TAAACAAGCT
GCCAGTGCAG CTAAGATTTT CAATAAGCAG CTGGTTGGTG CCGAATCCTT TACCACGATC
GGGAAGCATT GGAACGATGT GATCTGGGCA GACATGAAGC CGAGTGTAGA CCATGAGTTT
TGTGCCGGCC TGAACCTGGT ATATTTTCAT ACCTTCACTT CTTCTCCTAA AGAAATGGGA
ATGCCCGGCC AGGAGTATTT TGCCGGTACG CACTTTAACC CTAATGTGAC CTGGTGGAAT
TATTCGACAG CATTTCTGAG TTACCTGACC CGCTGCCATT ACCTGCTGCA AAAGGGAACA
GCACTTTCGG ATGTACTGTA TTATTATGGA GACCATGTGC CCAATCTGGG CAGGCTGAAA
GAAGATGACC CTGCGGGGGC ATTGCCGGGA TATGATTACG ACCTGATCAA TGAAGACCGC
CTGCTCGATC TGACGGTTAG GGACGGCAAA ATCGAGTTGC CCCATGGTGT AAATTACCGG
GTGCTTGTTT TACCAGACCA TAAGATCTTG TCATTGGCAG TGATCAGAAA AGTAAAAGCA
CTGGTAAATG CCGGGGCAAC GGTGATTGGT TTAAAGCCCC AATCTACCAG TAGCCTGGTG
GGTTATCCGG CTGCTGAAAC GGAACTCAAT CTGCTGGCAG ATGAACTATG GGGAAAGGGC
AATACCTCAG CTGGCGAAAA AGTACTGGGA AAAGGGAAAG TAATCTGGGG TAAAACTGCG
GCCAATGTAT TGCTGGAAAG TGGCCTTCCT TATGATGTTA AGATTGTGGC TGAAAACAAA
ACAGATAAGT TTGATTATAT CCACCGTTAT TTGCCTGATG GAACAGACAT TTATTTTATT
TCCAATCAAA ACAATAAGCA GGTAGCCGTT TCCTGTACTT TCCGGATTGC TGACAGAATG
CCCGAATTAT GGGATCCCTT AAAGGGCGAA ATCAGGGATG CAAAGGCTTA TCAACAAAAG
GACGGCCTGA TTACGGTACC CTTGGTTTTT GACCCGAATG GTTCAGTGTT TGTGGTTTTC
AGAAAGCCTC TTGGCAGTAA AGAAGGAAAG AAAACGGACA ATTATCCCGG ATACAAGGAG
CTGGAGCAGC TTTCTGGTGC CTGGGATGTG CGTTTTGATC CCAGATGGGG TGGTCCTGCT
TTAGTAAAGT TTGATACTTT GCAAAGCTGG ACAGAACGGC CGGAGGATGG GATCCGTTTT
TATTCGGGGA CAGCAGTATA TGCCAAAAAT TTTAAGGCAA CGAAAACAAA ATCAAAAAGG
CTTTTTCTGG ACCTTGGAGA AGTTAAGGAT GTAGGTATTG CTAAAGTAAA ATTAAATGGG
AAAGATCTGG GTATTTTGTG GAGCCCGCCG TTCCGGGTGG AGATTACAGC TGCGTTGAAA
ACCGGTGATA ATAAACTTGA GGTTGAAGTT GTGAATAGCT GGCGGAACCG CCTGATCGGG
GATGACAGTT TACCAGCCGA TCAAAGGTTG ACGAAAACGA ATATTAAAGT TACTCCTGCA
TGGAAAATTT TACCTTCAGG ATTGTTGGGG CCGGTTGTTT TGATGGAATC TAGTGAGAAA
TAG
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| Protein sequence | MRIIVKTIIL LFFALPVCGQ NPKSVLPKET NVIVDAEFQR PGSTYGTRCW WWWLNGNVTQ
QSITRDLEEM KAKGFSGACI FDAGGANQVG NRQVPEGPMF GSPDWRALYL YAIREAKRLG
LVMSMNIQSG WNLGGPDVSP EEAAKQVTFS ELGIKGGTKI NQKLVLPAIR DDYYKEIAVL
AFPDKNKAHA PIHDLENKTA SKEAGGSVPD TRPFLTDIAG VPGEEDALSK QVLNISKYFK
DGVLNWDAPA GNWKVIRIGY TTTDARTSTT SGKWDGRVLD FLSEKSFNRY WDTHVEPLLR
LIGPMAGTTL RYLQTDSFEG GGMNWTDGFA DEFKKRRGYD LTLFLPVLTG KIIESRSVSV
RFLNDFRKTI GDLVSEKHYG TFAKRSRAHG IGILPESAGP HAGPFDGLKN YSHSEVMMSE
FWSPSPHRPR PIDRFFVKQA ASAAKIFNKQ LVGAESFTTI GKHWNDVIWA DMKPSVDHEF
CAGLNLVYFH TFTSSPKEMG MPGQEYFAGT HFNPNVTWWN YSTAFLSYLT RCHYLLQKGT
ALSDVLYYYG DHVPNLGRLK EDDPAGALPG YDYDLINEDR LLDLTVRDGK IELPHGVNYR
VLVLPDHKIL SLAVIRKVKA LVNAGATVIG LKPQSTSSLV GYPAAETELN LLADELWGKG
NTSAGEKVLG KGKVIWGKTA ANVLLESGLP YDVKIVAENK TDKFDYIHRY LPDGTDIYFI
SNQNNKQVAV SCTFRIADRM PELWDPLKGE IRDAKAYQQK DGLITVPLVF DPNGSVFVVF
RKPLGSKEGK KTDNYPGYKE LEQLSGAWDV RFDPRWGGPA LVKFDTLQSW TERPEDGIRF
YSGTAVYAKN FKATKTKSKR LFLDLGEVKD VGIAKVKLNG KDLGILWSPP FRVEITAALK
TGDNKLEVEV VNSWRNRLIG DDSLPADQRL TKTNIKVTPA WKILPSGLLG PVVLMESSEK
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