| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0930 |
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| Symbol | |
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| ID | 8252024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1082802 |
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| End bp | 1083224 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 644934585 |
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| Product | DNA mismatch endonuclease Vsr |
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| Protein accession | YP_003091214 |
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| Protein GI | 255530842 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3727] DNA G:T-mismatch repair endonuclease |
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| TIGRFAM ID | [TIGR00632] DNA mismatch endonuclease Vsr |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.202867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000000699744 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAGACG TACACTCAAA GGAAACCCGC TCTTATAATA TGAGCAGAAT AAAAGGGAAG
GATACTAAAC CTGAACTTTT AGTGCGTAAA TTTCTGCATA AAAACGGATT TCGTTACCGT
ATTCATGTTA AAGATCTTCC GGGCAAGCCA GATATAGTTT TACCAAAATA TAAAACTGTT
ATTTTTGTGC ACGGTTGCTT TTGGCATGGT CATGCTGGAT GTCGGTACTA CGTCATTCCA
AAGACCCGAA CTGATTGGTG GTTAAATAAA ATCAATGGTA ATGTAACTAA GGATCTTAAA
TCCAAACAGG CACTAATTGA TAGTGGATGG AATATAATTG AAATTTGGGA ATGTGAGCTT
AGGAAGGCCA GGATTGAGAA TACGCTCTTA GCTTTAAAAG AAAGTTTTGG TATAATCAAA
TAA
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| Protein sequence | MTDVHSKETR SYNMSRIKGK DTKPELLVRK FLHKNGFRYR IHVKDLPGKP DIVLPKYKTV
IFVHGCFWHG HAGCRYYVIP KTRTDWWLNK INGNVTKDLK SKQALIDSGW NIIEIWECEL
RKARIENTLL ALKESFGIIK
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