| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0924 |
|---|
| Symbol | |
|---|
| ID | 8252018 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 1077543 |
|---|
| End bp | 1078190 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 644934579 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003091208 |
|---|
| Protein GI | 255530836 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.000933564 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.000000000105152 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGGTATTA TCAGACAGGG GATCCTTGGC GGGTTCCGAA ACAAAACAGG AAGTGTGGTG
GGGGCTTATT GGCGCAACCG CGATGTGATC AGGGGTTTGC CCCGGGTAAG CAACAAGCCG
GCAACCCAGG CGCAGATTAA CCAGCGGTTT AAATTTGGCT TGGTTACGGG CTTTTTGGCA
CGCCTTTCCA GCTTTATTGA CCTGGGCTTT GGTTCGGGGA ATGGCTCAGT AAGTGCGATG
AATGAGGCCG TATCCTATCA CCTGCGTGAA GCCATTACCG GTGCAGCGCC CAATTTCAGT
ATCGACTACA GCAAATTGAA GATCAACAAA GGCAAGCTGT TGCTGGCCAA TGGCATAGAA
GTGGCCATTA CCGTGGCTGC CCGTATTGAC TTCAGCTGGC TGAACACGGT GCCCGACGGC
AAATACAAGG ATGCGACAGA CAGGGCCAAT GTGGTGGTGT ATAATCCGGC AAAGAACAGC
TTTGTGACTT TGCCTGGTGC TGCTGCCCGT TCGGCCTTAG GTTACAACTT GTTGCTGCCC
GCCGATTACA GTGGCGATGA GGTGCATTGC TACATCAGCT TTAGCTCGGT AATCCACAAA
AAACTGGTAT CTGATACCTT TTATGTGGGA GAGTTTATTG TGCTGTAA
|
|---|
| Protein sequence | MGIIRQGILG GFRNKTGSVV GAYWRNRDVI RGLPRVSNKP ATQAQINQRF KFGLVTGFLA
RLSSFIDLGF GSGNGSVSAM NEAVSYHLRE AITGAAPNFS IDYSKLKINK GKLLLANGIE
VAITVAARID FSWLNTVPDG KYKDATDRAN VVVYNPAKNS FVTLPGAAAR SALGYNLLLP
ADYSGDEVHC YISFSSVIHK KLVSDTFYVG EFIVL
|
|---|
| |