| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0893 |
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| Symbol | |
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| ID | 8251987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1045262 |
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| End bp | 1048189 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934548 |
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| Product | phospholipase D/transphosphatidylase |
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| Protein accession | YP_003091177 |
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| Protein GI | 255530805 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00370965 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACATAT TAAAATGGAT TAAATACTGG CGTGATAGTT TGGCCGATGC TGAAAGCATC
AATGTAGATG TTTCAAAAAT AGATGCCAAA TACAAAACTG AAGCTTATAA CTTTGAGCAA
GCAACGCTTC CTGATCAACT ATTTAAAGAA CTTTGGCCAA AAAATGAACT GGAAGCCCTT
AAAGAAGGCC AGGTTCTGGA TAAAGAAATA CTCATCTCGC CATTGTCACT TGTTCCGCGG
TTAAACCATG CCATTCCCAA AGCCAACGAA GAAGAAATAT CACCTTTCTG GATACCTGCA
CTGCTGAGTT CTGAAAATGA ACTGAAACCC AGGCAAGACA TGTATCCCCT GATCCCAAGA
AAGATATTAG ACCCCGTTTC TTACAGGGAT ATTGTATTTT CAAATGTAGA TCAGGTAGAC
GAGGCACTAG CCAAAGTAGA ATTGAGCACC GATACCTGGA AAGTATACCA TCAATCGCTC
AATAAAATTT TCAATTATAT TACCGGCACA GACATCCAGG ATTTTAAAGC CCAGGAATTC
TTTGAAGTAA AATACCAATG GGTTTTTATA CCCGATGAAG TGGTTAAAGG CACATCACAT
CATATTCTTG AGCTGTACAG AAGCCTGATC AAACAATCCA GCTTTCCAAG GCTGTTGAAA
ACAATCATTA AAGAAGCACG CCCCGTTCTT AACCAGCAAT ACACAAAAGA TGAAGTTTTT
AACAGATCAG CAGGCCACCT GGGGCAAATG AACAATGGTT TTGGTTTATC ACCATCGCAA
CGTAAAAGTC TGGCCCATAA CCTTGATCTG AAACACGGTG AAATATTGGC TGTCAATGGC
CCTCCCGGAA CAGGAAAAAC CACATTGATC CAATCTGTTA TTGCCGATAA TTTCGTTAAG
TCTGCCATGA CCGGGCAAAA CCCGCTGATC ACCGTGGCCA GTTCTACCAA CAACCAGGCC
ATTACGAATA TCATTGACAG CTTTTCCAAA GGCAATTCCG GAACTTTGCT TGAACAAAGA
TGGCTGCCAG ATATCACTTC ATTTGCTTTA TATATGGTTT CCGGCGATCC CGAAAAGATT
AAGAAATCGA AGGAGCGGAA CTGGATGTAC CATAGTTCTA AAAAAGGGGA TAGCGTACTT
ACTGAAATTG AGAACGAAGT TTACCTGCAA ACCGCCAGAG CCTCGTTCCT CGAAAAACTG
TCAACTTTCA GCGGCATTGA TTTTACCGAC ATTACCACTT CGCAGAAATA CCTTCAAAAG
CAGATTAAAA AATCATCTGA ACTGATTGCA GAAGGACTTA AAGTCTGGAA ACAGTTCAAA
TCGGTTTATC ATTTGCTGGT TGATTATGAT GCTGCAGCAT ACGAAGGGAA AGACTTTTCA
GGAGTTAATG ACCAGTTTTT TGAAAGGGAA ATCTCGGATG TCAGCAAGCT GATCACAAAG
CTTGTGGAAG CCAGGCAGAA AGAACCCTTT TATTTTTGGT TGCTGTCCTT TTTAAAACCA
GTCAAAACAC AACGCAAATT ATATTATGAA TCCATATTTG CAGATTGTTC TTTTGATACC
TCAACCTGGG ATTTTTCTTC CTTTAGTACG CTTCAACCCA ATTTAATAGG TAAATCTGAA
AAGATAAAAA AAGCTTTTTC ACACTATAAA GCCTTCTTCA AATGGCTGAA TTCAACAGAA
GGACTTAAAA ATGAATATTT TTATATAGAC GATTATACCG AAGATGATCG CTTTCTGGAT
AAACTGGATA CCAAAATCCG ATACCAGAAC TTCCTGTTTG CCGTACATTA CTGGGAATCC
AGGTGGATTG AAGAAACCTC ATCGGCACTT CAGGATGATT CTAACTGGAA GAATACAGAA
GCTGGTACAA TGAACAGGTT ACACCGTTTT GCCATGCTCA CACCTTGCTT TGTATCCACA
TTTCACATGC TGCCCAAAAT GATGCAGTAT ACCAGATATC CTTCCAGGCA GATTGACTAC
TTATACGATT TCATTGATCT GCTTATTGTA GATGAAGCAG GGCAGGTAAG TCCGGAAGTT
GGTGCCCCAT CCTTTAGCCT GGCCAAGAAA GCATTGGTAG TAGGAGATAA CTATCAAATT
GAACCGGTCT GGAATATTGA CGGACGTACC GATGAAGGCA ACCTGTTAAG AAACCAGTTG
ATAACAAAAG GAGATAACAA CAGAATTGAG CAATTGATGG CTTCAGGCTA TATGTCTTCA
AACGGAAGTT TGATGAAACT TGCTCAAAAG AGCTGCAGTT TTGCCTACAG CAAAAAGGAC
CGGGGGCTGT TGCTTACAGA ACACCGCCGT TGCCTCAACC AAATTATAGC GTTTTGCAAT
GAGCTGGTTT ACAACAATCA GTTGGAGCCG CTTTCCAGCC TGAGGTACGA AAAATCTGAC
TTCCTGCCAC CCATGGGCTT TTTAAAAATT GCAGGGCAAT CCGATAAGTC TGGTACCAGC
AGATTTAACC GGGCAGAGGC GCAAGGTATC ATCAAATGGC TTAAAGCAAA TGAAAGCAAA
ATCGTTGAAT TCATTTACAG TAAAGAGCTG AAAGAAAGTA AAAGCCCTGA AAAAGTTAAA
CGTAAAGCCC TCCATGATCT GGTTGGAATC GTTACCCCTT TCAGCGCTCA GAAAAGGTTT
TTAACAGAGG CCATGCATTT AAATGGCTTA CAGCCTTCAT TATTTCAATA CGGTACTGTA
CATTCCTTAC AAGGAGCCGA AAAGGATATT GTGATCTTTT CTCCGGTATA TACCAGTGAT
GTAAAATCAG GTTATTTTTT TGATATGGGG CCCAATATGT TAAATGTAGC AGTATCCAGG
GCCAAAAGAA GTTTTATTGT AGCCGGGGAT AAGGACATAT TTCGGCTTGG TAACAAAAAC
GTGCCATCCA GTTTGCTTAC AAAATATATT AAAGATGAGA TAAAGTAA
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| Protein sequence | MDILKWIKYW RDSLADAESI NVDVSKIDAK YKTEAYNFEQ ATLPDQLFKE LWPKNELEAL
KEGQVLDKEI LISPLSLVPR LNHAIPKANE EEISPFWIPA LLSSENELKP RQDMYPLIPR
KILDPVSYRD IVFSNVDQVD EALAKVELST DTWKVYHQSL NKIFNYITGT DIQDFKAQEF
FEVKYQWVFI PDEVVKGTSH HILELYRSLI KQSSFPRLLK TIIKEARPVL NQQYTKDEVF
NRSAGHLGQM NNGFGLSPSQ RKSLAHNLDL KHGEILAVNG PPGTGKTTLI QSVIADNFVK
SAMTGQNPLI TVASSTNNQA ITNIIDSFSK GNSGTLLEQR WLPDITSFAL YMVSGDPEKI
KKSKERNWMY HSSKKGDSVL TEIENEVYLQ TARASFLEKL STFSGIDFTD ITTSQKYLQK
QIKKSSELIA EGLKVWKQFK SVYHLLVDYD AAAYEGKDFS GVNDQFFERE ISDVSKLITK
LVEARQKEPF YFWLLSFLKP VKTQRKLYYE SIFADCSFDT STWDFSSFST LQPNLIGKSE
KIKKAFSHYK AFFKWLNSTE GLKNEYFYID DYTEDDRFLD KLDTKIRYQN FLFAVHYWES
RWIEETSSAL QDDSNWKNTE AGTMNRLHRF AMLTPCFVST FHMLPKMMQY TRYPSRQIDY
LYDFIDLLIV DEAGQVSPEV GAPSFSLAKK ALVVGDNYQI EPVWNIDGRT DEGNLLRNQL
ITKGDNNRIE QLMASGYMSS NGSLMKLAQK SCSFAYSKKD RGLLLTEHRR CLNQIIAFCN
ELVYNNQLEP LSSLRYEKSD FLPPMGFLKI AGQSDKSGTS RFNRAEAQGI IKWLKANESK
IVEFIYSKEL KESKSPEKVK RKALHDLVGI VTPFSAQKRF LTEAMHLNGL QPSLFQYGTV
HSLQGAEKDI VIFSPVYTSD VKSGYFFDMG PNMLNVAVSR AKRSFIVAGD KDIFRLGNKN
VPSSLLTKYI KDEIK
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