Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0883 |
Symbol | |
ID | 8251977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1037251 |
End bp | 1037712 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644934538 |
Product | hypothetical protein |
Protein accession | YP_003091167 |
Protein GI | 255530795 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.00617037 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGTGTTT TGTGCAGCGT TAGTGTTTTC GGTCAGCGGA CAGACAGTTC AACCACCAGT ATCAGGGCAA AAAAAATCAA TAAAACCCCT CAGATTAAAG CCAGTGTACC CACTTATAAG CCTAAATATG CCGTAGGATA CCTGCAATAC AATGATTTAA TTTCTGGCAA TAAGAGTTTA ACCAATCCTA AACAGGAAAA GATACTTACA GTTTTAAAAG TTTATCCTAA CCCGGTTGAT GATCAGATCA ACCTGATCTT GCGTATAGAC AGGGAATCCA ACCTTTCTGT AAAAATCATG GACCTGCTGG GCAATGAAGT GGTCACACTT TCTAACGAAC GGATTCCTGC AGGTGAGCAA ACCAAAAGTT ATACCATTCC AAACCGTTTA AACAGCGGTA TATATTTTCT AAAAATCATG TCCGGCGCAG AAACAGTTGT AAAACGAATC TCAGTTTTAT AA
|
Protein sequence | MSVLCSVSVF GQRTDSSTTS IRAKKINKTP QIKASVPTYK PKYAVGYLQY NDLISGNKSL TNPKQEKILT VLKVYPNPVD DQINLILRID RESNLSVKIM DLLGNEVVTL SNERIPAGEQ TKSYTIPNRL NSGIYFLKIM SGAETVVKRI SVL
|
| |