Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0878 |
Symbol | |
ID | 8251972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 1033599 |
End bp | 1034150 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644934533 |
Product | bifunctional deaminase-reductase domain protein |
Protein accession | YP_003091162 |
Protein GI | 255530790 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0262] Dihydrofolate reductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00263452 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAAAAG TAATTGCCGC ATTCAATATG ACACTTGACG GAATTTGTGA CCATACAGCA GGAATTCCCG ACGAAGAAAT ACACTATCAT TATACTAACC TGCTAAATAA CGCAGGCAGC ATTCTATATG GAAGGATAAC CTATCAACTC ATGCAATTTT GGCAAACACT GTTAAAAAAT CCTTCCGATG AAAAATCAAT GAATGATTTT GCCATTGCTA TAGACAAAAT TCCAAAAATT GTTTTTTCAA ATACGCTTAA AAGCACAGAC TGGGACAGTG CTCAATTGTC AGATCGAACT CTTGAAGAAG AAGTTTTAGA ACTCAAACAA CAATCGGGTA AAGACATTTT AGTGGGCAGC CGGAGTTTAA TTATACAGCT CATGAAACTT AATTTGATTG ATGAGTTGCA GCTTTGTATT TACCCTGTTA TAGCGGGAGC AGGTTTGCCA TTATTTGAAA ACCTAAAAGA CAGGACCATT CTTAAATTGA TAAAGACAAA AACTTTTAGC GGTGGTGCAG TAACGCTTTA TTATGAGCGG GGCGCCGGGT GA
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Protein sequence | MRKVIAAFNM TLDGICDHTA GIPDEEIHYH YTNLLNNAGS ILYGRITYQL MQFWQTLLKN PSDEKSMNDF AIAIDKIPKI VFSNTLKSTD WDSAQLSDRT LEEEVLELKQ QSGKDILVGS RSLIIQLMKL NLIDELQLCI YPVIAGAGLP LFENLKDRTI LKLIKTKTFS GGAVTLYYER GAG
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