| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0873 |
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| Symbol | |
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| ID | 8251967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1027760 |
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| End bp | 1028719 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644934528 |
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| Product | Transketolase central region |
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| Protein accession | YP_003091157 |
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| Protein GI | 255530785 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3958] Transketolase, C-terminal subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.199119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00317558 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAGT ATACATACAC TGAAAAAAAA GATACGCGTT CTGGTTTTGG AGCTGGATTG
CTTGAAGCCG GAAAAAAGAA CCCTGAAGTA GTAGCACTCT GTGCTGATCT GGTAGGCTCA
TTAAAAATGG ATGCATTTAT TAAGGAATTT CCTGAACGCT TTTTCCAGAT CGGTATTGCT
GAAGCCAATA TGATTGGTAT TGCAGCTGGC TTAACCATTG GAGGAAAAGT TCCTTTTACC
GGAACCTTTG CTAACTTTTC GACCGGAAGG GTTTACGACC AGATCCGCCA GTCGGTAGCT
TATTCTGACA AAAATGTAAA AATCTGTGCT TCGCATGCAG GTTTGACCCT GGGCGAAGAT
GGTGCAACCC ACCAGATCCT GGAAGATATA GGCCTGATGA AAATGCTGCC TGGTATGACA
GTAATCAACA CCTGCGATTA TAACCAGACT AAAGCTGCTA CCATTGCTAT TGCTGAACAC
CATGGCCCTG TTTACCTGCG TTTTGGTCGC CCGGTAATCC CTGTATTTAC AGATCCTGAC
CAGAAATTTG AAATTGGAAA GGCCTGGATG GTAAATGAAG GCAAAGATGT AACCATTATT
GCTACCGGCC ATATGGTTTG GAAAGCTATT GAGGCCGGAG AGAAACTTGC TGAACTGGGC
ATTGATGCTG AGATTATAAA CATCCACACG ATTAAACCTT TGGATGAAGC AGCAGTCCTT
AAATCAGTAA AGAAAACTGG TTGCGTGGTT ACCTGCGAGG AACATAATAA ATATGGTGGT
TTAGGAGAAA GTGTTGCAAG GTTACTTTCA ACAGAGCTGC CTACACCACA GGAATTTGTT
GCCGTAAACG ATAGTTTTGG AGAAAGCGGA ACACCTGATC AATTGATGAC CAAATACGGA
TTAGACAGTG TAAACATTGT TGAAGCTGCA CAAAAGGTCA TTAAAAGAGC CAAAAAATAA
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| Protein sequence | MKKYTYTEKK DTRSGFGAGL LEAGKKNPEV VALCADLVGS LKMDAFIKEF PERFFQIGIA
EANMIGIAAG LTIGGKVPFT GTFANFSTGR VYDQIRQSVA YSDKNVKICA SHAGLTLGED
GATHQILEDI GLMKMLPGMT VINTCDYNQT KAATIAIAEH HGPVYLRFGR PVIPVFTDPD
QKFEIGKAWM VNEGKDVTII ATGHMVWKAI EAGEKLAELG IDAEIINIHT IKPLDEAAVL
KSVKKTGCVV TCEEHNKYGG LGESVARLLS TELPTPQEFV AVNDSFGESG TPDQLMTKYG
LDSVNIVEAA QKVIKRAKK
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