| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0866 |
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| Symbol | |
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| ID | 8251960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 1019140 |
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| End bp | 1023570 |
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| Gene Length | 4431 bp |
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| Protein Length | 1476 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644934521 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_003091150 |
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| Protein GI | 255530778 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00672697 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTATTTAA TATTTGACAC CGAAACCACA GGTTTACCAC GCAATTGGAA TGCGCCAATT
ACCGATACTG ACAATTGGCC AAGGTGTATT CAAATCGCCT GGCAATTGCA TGATGAGCTG
GGAAATATGA TAGAGCATCA GGATTACCTG GTGAAGCCCG ATGGTTTTAA TATACCCTAT
GACGCCGAGC GTATTCATGG AATCTCTACA GAGCTGGCTA CAGAGCAGGG GATAGAACTG
GCTGAAGTTT TAGAGAAATT TAATATTGCT TTATCCAAAG CTAAATTTGT TGTTGGCCAA
AATATAGGTT TTGATGTCAA CATTATGGGC TGTGAGCTTT ACAGGCTGGG TGTAGAAAGC
CCGATGGCGC AAATGCCTGT GCTGGATACC TGTACCGAAA TTACAGCCGA GTTATTGAAA
CTTCCAGGTG GGCGTGGGGG TAAATTTAAA CTGCCTAACT TAACAGAGCT TCACCAGTAT
CTTTTTGGTG AGCCTTTTGC CGAGGCCCAC AATGCTACAG CCGATGTTGA GGCTACTACC
CGTTGTTTTT TACAGCTGAT CAAAATAGAT GCCTTCAGAC CAGAGCAGTT GCAGGCCGAT
CAGCAATACA TAACCCGTTT TAAACAAAAT ACCCCGCAGG TATTTGAACG TGTTGGCCTG
AACCACATCA ACCTGAAAGC GGCCTCTGAT GAGATCAGGA AACGCCTGCA AAAAGATGAT
GGAGGAAAAA TCTCCAAACG TACTTTAGAA GAAAATAAAG AAGCGCTAAA AGATGCTGCT
TTTGTGCATT TGCATAACCA TACCCAATTT TCGGTATTGC AGTCTACCAT CAACATCCCT
TCCCTCATCA AAGCTACGGC AGCCCATAAA ATGCCGGCCG TAGCCATAAC AGATCATGCC
AACATGATGG GGGCATTCCA TTTTGTAAGC CAGGTGCTTA ACCACAATAA AGGGGTAGAA
GCCAGAAATG CTGCTGCAAT AGAAAAAGGT GAAACGGCAG AGGAGCAGAC CATTAAACCA
ATTATAGGCT GTGAATTTTT TGTCTGCGAA AACCATGAAG ACAAAAAGAG AAAAGACGAT
GGTTACCAGG TGGTTTTCCT GGCCAAAAAT AAAGCCGGTT ATCATAACCT GGCTAAAATG
TCGTCCATTG CCTATACCAG GGGTTTTTAT TACATCCCCC GGATAGATAA GGCCATAGTT
GAACAATATA AAGAGGATAT CCTGGTTTTA TCTGGTAACT TATATGGAGA GATCTCCAGT
AAGCTCTTAA ACATGGGTGA AAAGCAGGCC GAAGAAGCAC TGCTCTGGTG GAAATCCCAG
TTTGGCGATG ATTTTTATAT CGAGCTGATG CGGCACAACC AGGAAGATGA AGATATTGTA
AATGCCACAC TTGTAAACCT TGCAAAAAAA CATGAGGTAA AGCTGATCGC TACCAATAAT
ACCTATTACA TCAATAAAAA AGATGCCAAT GCGCATGATA TTTTATTGTG TGTAAAAGAA
GGCGAGAAAC AGGCTACCCC AATAGGGCGC GGAAGGGGTT ACCGTTTTGG TTTACCTAAC
CAGGAGTACT ATTTCAAATC TCCTGAAGAA ATGAAAAGCC TGTTTGCTGA TTTGCCGGAA
GCGATTAGCA ATATACAGGA GGTAGTAGAC AAGATCGAAG CCTATAAACT GGCCCGGGAG
GTACTTTTAC CTAAATTTGA TATTCCTGAG GAGTTTTTAG TTAAGGAAGA TGAAGAAGAC
GGAGGCAAAA GAGGGGAAAA CAAATTCTTA AGGCACCTGA CTTATGTTGG GGCAAAAAAG
AGATACGGAG AAATTACAGA CGACATTGCG GAGCGGCTGG ATTTTGAGCT GCAGACCATT
GAAAAGACCG GTTATCCCGG ATATTTTCTC ATTGTACAGG ATTTTATTGC CGAAGCACGG
AACTTGGATG TATCTGTAGG CCCCGGAAGG GGATCAGCTG CAGGTTCTGC TGTGGCCTAC
TGTTTGGGTA TCACCAATAT AGATCCAATT AAATACGATC TCCTTTTTGA GCGTTTCCTT
AACCCCGATC GTGTATCCAT GCCCGATATT GATATCGACT TTGACGATGA AGGCCGTGGA
AGGGTTATGG ATTATGTAAT CAAAAAATAC GGATCTAACC AGGTTGCCCA GATCATCACT
TATGGAACCA TGGCCGCCAA ATCTTCTGTA AAGGATACGG CCCGTGTGCT CGACCTGCCA
CTTTTTGAGG CAGAGAAGAT CGCCAAGCTG ATTCCGAATA TGAAGCTGGC TAAGATTTTT
ACCCTCGATG AAAAGAGTTT AAAAGAGGCA CTTCGTGCTG ATGAATATGA AAAGATCCTG
GAGCTTAAAG CCCTGGCGGG TGCCAAAGAC CTGGGGGCGA AAACACTGGA ACAGGCGCAG
ATTTTAGAGG GCTCTTTAAG AAATACCGGT ATCCATGCCT GTGGGGTAAT TATTACACCA
AGCGACATTA CCAATTTTGT TCCGGTTGCT ACCGCTAAGG ATTCAGATCT GTATGTTACC
CAGTTCGACA ACTCGGTGGT GGAAAGTGCA GGTCTGTTAA AGATGGACTT TTTGGGGTTA
AAAACCTTAA CCCTCATTAA GGATACCGTT AAACTGGTTA AATCCAGGCA TAACATAGAC
CTGGATCCCG ATAATTTTCC GATTGACGAT GAGCGGACAT ACGAGCTTTT CCAGCGTGGG
GAAACCATTG GTATTTTCCA GTACGAAAGT ACGGGGATGC AAAAATACAT GAAAGAGCTG
AAGCCTACTG TATTTGGCGA TTTAATTGCC ATGAACGCCT TGTACAGGCC GGGCCCCCTG
GAGTATATTC CGAGTTTTGT GCGCAGAAAA AATGGTGAAG AGGAGATTAA ATATGATCTG
GATGCCTGTG AGGAATATTT AAAAGAAACC TACGGGATTA CGGTATATCA GGAGCAGGTG
ATGCTTTTGT CGCAAAAGCT TGCTGGCTTT ACCAAAGGCG AGGCCGATGT ATTGCGTAAG
GCAATGGGTA AAAAGCAAAA GGATGTACTG GACAAGATGA AGCCGAAATT TATAAAGCAG
GCAGCAGAGA AGGGCCATGA TGCGGTGATA TTAGAGAAAA TCTGGAAAGA CTGGGAAGCT
TTTGCCTCTT ACGCCTTTAA CAAATCACAC TCTACCTGCT ATGCCTGGAT TGCTTACCAG
ACCGCCTATT TAAAGGCCCA TTATCCTGCC GAGTATATGG CGGCAGTACT GTCCAACAAT
ATGAGCGACA TCAAGCAGGT TGCATTCTTT ATGGAAGAAT GCAAGCAAAT GGGTGTTCAG
GTACTGGGCC CTGATGTAAA TGAGTCTGAC ATTAAATTCT CGGTAAATGC ACAGGGCGAG
GTACGCTTTG GCCTTTCGGG TATTAAAGGG GTAGGAGAAA AAGCCGTAGA AAGTATTATA
GAAGACAGAC TGGAGAAAGG CATGTATAAA GACCTTTACG ATTTTGCCAG AAGGTCTAAT
ACCCGAACCG TAAATAAAAA AGCCTACGAA AGTTTTGTGT ATAGCGGGGC TTTTGATGCA
TTTGGATATC ATCGTGCCCA GTATTTCTTT GTGGGCATTA ACGATAAGAT GAATGGCATA
GAAAAAGTAA TTAAATATGC CAATGATTTT CAGAACAATG AATCTTCTTC CCAATCTTCC
CTGTTTGGCG GTTCTGTAGC CGATCTGATC CTGGAGCCAG CTTTACCTGT TGCGCCTGAA
TGGAGTTTAA TTGATAAGCT GAAGTACGAA AAAGATGCCA TCGGAATCTT TTTGTCCGGG
CATCCCCTGG ACAATTATAA GCTTGAATTA AAAGAATTCT GCCAGCATAA AGTAAAATGC
CTGTCACTGG TAAATAAAAT CAGGACAGGC GATACCAACG AAGAGGTACT GGCCGAGTTT
GAAAGCATAA AAAACAGGGA GCTTGTGGTT GGAGGCCTGG TGGTAGTGGC TGCACAGCGC
ATGACAAAAA CAGGAAAGCC TTTTGGCACA TTGGTGTTCG AAGATTATGA CGACAGTTGT
GAACTGGCTT TATTTGGCGA TGATTTTATC AAATTTAAGC AGTTTTTAAC CGATGGTTAT
TTTTTACAGA TCCGTGGAAG GGTAGCTGAA CGGTTTAGAA AAGAGGGCGA CTGGGAGTTT
AAGATTACTT CCATTAATCT TTTGTCAGAA CTAAGGGATA AACTGGCCAA AAGTGTAACC
ATCCAAGTAC CTATTGAACG TGTTAACGAC GACTTTATGG GGCAGATCCT GGCCATTCTG
GAAAATAATA AAGCAACTAC CGAGCAGCAA AACTGTCAAT TGCTGTTCGA TGTGTACGAC
AGGGAACAGA ATGTGATGGT CAAATTGCCT TCAAAATCGT TAAAAATTAA CCCCACCAAC
GATTTTCTGA GTCAGATAGA AGCCTTAAAT GTGAGTTCTA AGTTGAACTA A
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| Protein sequence | MYLIFDTETT GLPRNWNAPI TDTDNWPRCI QIAWQLHDEL GNMIEHQDYL VKPDGFNIPY
DAERIHGIST ELATEQGIEL AEVLEKFNIA LSKAKFVVGQ NIGFDVNIMG CELYRLGVES
PMAQMPVLDT CTEITAELLK LPGGRGGKFK LPNLTELHQY LFGEPFAEAH NATADVEATT
RCFLQLIKID AFRPEQLQAD QQYITRFKQN TPQVFERVGL NHINLKAASD EIRKRLQKDD
GGKISKRTLE ENKEALKDAA FVHLHNHTQF SVLQSTINIP SLIKATAAHK MPAVAITDHA
NMMGAFHFVS QVLNHNKGVE ARNAAAIEKG ETAEEQTIKP IIGCEFFVCE NHEDKKRKDD
GYQVVFLAKN KAGYHNLAKM SSIAYTRGFY YIPRIDKAIV EQYKEDILVL SGNLYGEISS
KLLNMGEKQA EEALLWWKSQ FGDDFYIELM RHNQEDEDIV NATLVNLAKK HEVKLIATNN
TYYINKKDAN AHDILLCVKE GEKQATPIGR GRGYRFGLPN QEYYFKSPEE MKSLFADLPE
AISNIQEVVD KIEAYKLARE VLLPKFDIPE EFLVKEDEED GGKRGENKFL RHLTYVGAKK
RYGEITDDIA ERLDFELQTI EKTGYPGYFL IVQDFIAEAR NLDVSVGPGR GSAAGSAVAY
CLGITNIDPI KYDLLFERFL NPDRVSMPDI DIDFDDEGRG RVMDYVIKKY GSNQVAQIIT
YGTMAAKSSV KDTARVLDLP LFEAEKIAKL IPNMKLAKIF TLDEKSLKEA LRADEYEKIL
ELKALAGAKD LGAKTLEQAQ ILEGSLRNTG IHACGVIITP SDITNFVPVA TAKDSDLYVT
QFDNSVVESA GLLKMDFLGL KTLTLIKDTV KLVKSRHNID LDPDNFPIDD ERTYELFQRG
ETIGIFQYES TGMQKYMKEL KPTVFGDLIA MNALYRPGPL EYIPSFVRRK NGEEEIKYDL
DACEEYLKET YGITVYQEQV MLLSQKLAGF TKGEADVLRK AMGKKQKDVL DKMKPKFIKQ
AAEKGHDAVI LEKIWKDWEA FASYAFNKSH STCYAWIAYQ TAYLKAHYPA EYMAAVLSNN
MSDIKQVAFF MEECKQMGVQ VLGPDVNESD IKFSVNAQGE VRFGLSGIKG VGEKAVESII
EDRLEKGMYK DLYDFARRSN TRTVNKKAYE SFVYSGAFDA FGYHRAQYFF VGINDKMNGI
EKVIKYANDF QNNESSSQSS LFGGSVADLI LEPALPVAPE WSLIDKLKYE KDAIGIFLSG
HPLDNYKLEL KEFCQHKVKC LSLVNKIRTG DTNEEVLAEF ESIKNRELVV GGLVVVAAQR
MTKTGKPFGT LVFEDYDDSC ELALFGDDFI KFKQFLTDGY FLQIRGRVAE RFRKEGDWEF
KITSINLLSE LRDKLAKSVT IQVPIERVND DFMGQILAIL ENNKATTEQQ NCQLLFDVYD
REQNVMVKLP SKSLKINPTN DFLSQIEALN VSSKLN
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