Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0865 |
Symbol | |
ID | 8251959 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 1018586 |
End bp | 1019071 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644934520 |
Product | Lipocalin family protein |
Protein accession | YP_003091149 |
Protein GI | 255530777 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3040] Bacterial lipocalin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.85479 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00294878 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGAGAACC AACCTGTACA ACGAGTAGAT ATTATGGCAT ATGCGGGAAA ATGGTATTCG CTGTATTCTA TTCCAACCTT TATGGATAAA CATTGGAGAG AAAAGGTAGA AACTTATGTA ATTCACCCTG ATGGATATTA TGCCGTGTTT ACTACATATA AGGTTACAGG TCAGGACAAA CGCAAATACA TACGGTCCAA ACTTTTTGTG GTAAGGGGCA GTAACAATGC GGTATTCAAG GCCCAGTTTG TATGGCCTTT TAAGGAAGAT TATTGGGTTA TAGAGCTTGC AGATGATTAT TCCTATGTAG TAGTTGGGCA TCCCAAACAT AAGCACTTAT TTATCATGGC CCGGAAGCCT GAAATATCTG CAACATTGTA TGCAGAAATT ACAGAACGCT GTACAAAAAA AGGCTATGAA ACTTCTAAAC TTGTATCGCA GGAACATAAG GCCGTTCAGC AGGCCCCTGA GAAAGAACAT GTTTAA
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Protein sequence | MENQPVQRVD IMAYAGKWYS LYSIPTFMDK HWREKVETYV IHPDGYYAVF TTYKVTGQDK RKYIRSKLFV VRGSNNAVFK AQFVWPFKED YWVIELADDY SYVVVGHPKH KHLFIMARKP EISATLYAEI TERCTKKGYE TSKLVSQEHK AVQQAPEKEH V
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