Gene Phep_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0865 
Symbol 
ID8251959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp1018586 
End bp1019071 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content40% 
IMG OID644934520 
ProductLipocalin family protein 
Protein accessionYP_003091149 
Protein GI255530777 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3040] Bacterial lipocalin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.85479 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00294878 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAGAACC AACCTGTACA ACGAGTAGAT ATTATGGCAT ATGCGGGAAA ATGGTATTCG 
CTGTATTCTA TTCCAACCTT TATGGATAAA CATTGGAGAG AAAAGGTAGA AACTTATGTA
ATTCACCCTG ATGGATATTA TGCCGTGTTT ACTACATATA AGGTTACAGG TCAGGACAAA
CGCAAATACA TACGGTCCAA ACTTTTTGTG GTAAGGGGCA GTAACAATGC GGTATTCAAG
GCCCAGTTTG TATGGCCTTT TAAGGAAGAT TATTGGGTTA TAGAGCTTGC AGATGATTAT
TCCTATGTAG TAGTTGGGCA TCCCAAACAT AAGCACTTAT TTATCATGGC CCGGAAGCCT
GAAATATCTG CAACATTGTA TGCAGAAATT ACAGAACGCT GTACAAAAAA AGGCTATGAA
ACTTCTAAAC TTGTATCGCA GGAACATAAG GCCGTTCAGC AGGCCCCTGA GAAAGAACAT
GTTTAA
 
Protein sequence
MENQPVQRVD IMAYAGKWYS LYSIPTFMDK HWREKVETYV IHPDGYYAVF TTYKVTGQDK 
RKYIRSKLFV VRGSNNAVFK AQFVWPFKED YWVIELADDY SYVVVGHPKH KHLFIMARKP
EISATLYAEI TERCTKKGYE TSKLVSQEHK AVQQAPEKEH V