| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0858 |
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| Symbol | |
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| ID | 8251952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 1012368 |
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| End bp | 1013186 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934513 |
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| Product | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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| Protein accession | YP_003091142 |
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| Protein GI | 255530770 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
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| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0149623 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGCAG AATTAAAAAA GTTAGTAGAA GCCGCTTGGG AAGACAGAAC TTTATTAGAA
TATAGTGAGC ATTGCGAAGC AATAGAAACT GTAGTAATGC AGTTGGATAA AGGAGAACTG
CGTGTGGCAG AGCCTATTTT AAACTCCTGG GGTGTAAATG AATGGATCAA AAAAGCAGTT
ATTCTTTACT TCCCTATCAG ACAAATGAAG GTGATTGAAA CCGGCCCTTT TGTTTATCAC
GACAAAATGA AACTTAAAAC CAATTATAAA GAATTGGGTG TAAGAGTAGT GCCGGGTGCC
AGTGCACGTT ACGGTGCATA TTTAGCAAAA GGGGTAATTA TGATGCCTTC TTATGTCAAC
ATTGGTGCTT ACGTGGATGA GGGTACCATG GTCGATACCT GGGCTACAGT AGGCTCGTGT
GCGCAGATTG GAAAACATGT ACACCTGAGT GGTGGCGTGG GTATTGGGGG TGTTTTAGAA
CCTATACAGG CTGCTCCGGT AATTATAGAA GACAATTGTT TTCTTGGATC AAGGGCCATT
GTAGTTGAAG GTGTAAAAGT AGAAAAAGAA GCGGTATTGG GTGCCAATGT AGTATTAACA
GCTTCTACAA AGATTATAGA TGTTACTGGT CCGACTCCGG TTGAATATAA AGGCATTGTG
CCGGCCCGCT CTGTGGTTAT TCCTGGTTCT TATGCAAAAA AATTCCCTGC AGGAGAATAC
CATGTACCCT GTGCGCTGAT TATTGGTAAG CGTAAAGAAT CAACAGATAA AAAAACTTCG
CTTAATGATG CATTGAGAGA AAATAATGTA GCAGTATAA
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| Protein sequence | MIAELKKLVE AAWEDRTLLE YSEHCEAIET VVMQLDKGEL RVAEPILNSW GVNEWIKKAV
ILYFPIRQMK VIETGPFVYH DKMKLKTNYK ELGVRVVPGA SARYGAYLAK GVIMMPSYVN
IGAYVDEGTM VDTWATVGSC AQIGKHVHLS GGVGIGGVLE PIQAAPVIIE DNCFLGSRAI
VVEGVKVEKE AVLGANVVLT ASTKIIDVTG PTPVEYKGIV PARSVVIPGS YAKKFPAGEY
HVPCALIIGK RKESTDKKTS LNDALRENNV AV
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