Gene Phep_0845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0845 
Symbol 
ID8251939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp995640 
End bp996083 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content43% 
IMG OID644934500 
Productribosomal protein L11 
Protein accessionYP_003091129 
Protein GI255530757 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0080] Ribosomal protein L11 
TIGRFAM ID[TIGR01632] 50S ribosomal protein L11 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.518378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG AAGTCAGTGC GCTTGTTAAA TTACAGATCA AGGGTGGAGC TGCAAATCCA 
TCGCCGCCGG TAGGACCTGC ATTGGGTGCT AAAGGGGTGA ATATCATGGA GTTTTGCAAA
CAGTTCAATG CTCGTACCCA AGATAAGCCC GGTAAAGTAT TACCAGTTGT AATTACTGTT
TATGCTGACA AGTCTTTCGA ATTTATCATC AAAACCCCTC CGGTTGCTAT CCAGTTAAAG
GATGCTACTA AATTACAGAG TGGTTCTGCT GAGCCCAACC GTAAGAAAGT TGGTTCGGTG
ACTTGGGATC AGGTTAAGTC AATTGCTGAA GATAAAATGA CTGATTTAAA TGCATTTACT
ATCGAATCGG CAATGAGTAT GGTTGCCGGT ACAGCACGCA GTATGGGAAT CACCGTTAGC
GGTGATGCAC CTTGGACAAA TTAA
 
Protein sequence
MAKEVSALVK LQIKGGAANP SPPVGPALGA KGVNIMEFCK QFNARTQDKP GKVLPVVITV 
YADKSFEFII KTPPVAIQLK DATKLQSGSA EPNRKKVGSV TWDQVKSIAE DKMTDLNAFT
IESAMSMVAG TARSMGITVS GDAPWTN