Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0834 |
Symbol | |
ID | 8251923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 985825 |
End bp | 987576 |
Gene Length | 1752 bp |
Protein Length | 583 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644934484 |
Product | phospholipid/glycerol acyltransferase |
Protein accession | YP_003091118 |
Protein GI | 255530746 |
COG category | [R] General function prediction only |
COG ID | [COG3176] Putative hemolysin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.16421 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATCA TAACTACCAA AGAGTTTGCA AAAGCCACAA AGATAGATAA ATTAGGTGTA CCAGGCTTGG CAGCTCTGCT CATGGAGATG ATGAAATTAA ACGACATCAA CAAAGTTTTT TCTCAGAATG AACATTTTAA CGGACTTGAA TTTGTCGACA AAATATTAGA AACTATTGGT GTAAGTATCG ATTTTGATGA AGATGACCTT AAAAATATAC CAAAAACCGG GGGCTTTATA GCCATTGCCA ACCACCCTTA TGGTGGTGTT GAGGGACTTG CTTTAGTAAA ACTACTTTGT ACAGTCAGAC CAGAAGCCAA GGTTATGGTC AACTTCATTC TAAAAAAGAT CCCCAATCTA AGTGAGTTCT TTGTTGCGGT CAATCCCTTC GAAAACGTGC AGCACACTTC CAGCATCAGC GGGTTAAAAG CAACGTTCGA CCTGTTACAG AGTGGCACAC CCATTGGCAT CTTCCCCGCA GGCGAAGTTT CTACTTTTAG CCTGGATAAA CAGGAAATTA CCGACAGGTT ATGGCATCCT GTAGTGGGTA AACTGATTGC CCGGGCAAAA GTGCCTGTAA TACCCATCTA TTTTCATGGC AACAATGGGG TATTGTTTAA TATATTAAGT TTTATACACC CCACCTTAAG AACAGCAAAA CTACCTTCTG AATTTTTAAA CAAACAGGGA CTTAAAATAA AGGTCAGAAT TGGCAAACCT ATAAATATAG AAGACATCTC TTACCATAAA AATACGAATA AGCTGCTCGA TTTTTTACGT GCGCGTACTT ATGCATTGGG TACCGGACTG GAAGAAGAAA AAAAACTGTT CAACCCCATC AACCTGTTTA AAATCAAGAA AAAACCAGAG CCTATTATTG AGGAAACAGA CCGTAACTTA ATTGTTAACG AAATTGAAGA GCTGGAAGGT TTCAGGGTAT GGCAGGAAAA AAATTATGAG GTATATATTG CACCTACAGT AGCCATACCT AACGTTTTAA GGGAAATTGG CCGCCTCAGG GAAATCACCT TCAGGGAGGT TGGTGAGGGT ACCAATAAAA AAATAGATCT CGACAATTAC GATATCTATT ACCACCATTT ATTTATATGG GACAAAGAGC TGCAGAATAT TGTTGGGGCT TACCGCATTG GTAAAGGAGA TGAGATCCTA AACACCATGG GCAGAAGAGG TTTTTATCTT TCTGAGCTTT TTAAAATTAA AGAGCCTTTT TATCCCTTGC TAAGAAAAGG CATTGAACTC GGACGCTCCT GGATCCGTAA AGAATACCAG CAAAAGCCAC TTCCCTTGTT CTTATTGTGG AAAGGCATTT TAAAGTACCT GCTGGATAAC CCCCAATACC GGTACATGTT CGGGCCGGTT AGCATCAGCA ACAACTTTTC CAAGTTCTCT AAATCGCTGA TCGTTGATTA TATCACTAAA AACCACTTTG ATTACGAACT GGCCCATTAC GTAAAACCAA AGAACAAATT TAAGGCCGAC CTGTCCGCCA TTGATAAGGA CCTGCTGATT GAAAGCAGTG AATCTTTAAA AGATCTTGAC AGCCTGATCT CTGATATTGA AAACTCTCAC ATCAAAATTC CCGTACTGTT AAGGCAGTAC ATGAACCTGA ATGCCAAGAT TATTTGCTTC AATATAGACC CTAAGTTTTC CGATTGCCTG GATGGCTTTC TGGTAGTTGA TATGCAGAAT ATCCCAGCCG AAATGCTGGA GAAGATCGGA AAGAATTTTT AA
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Protein sequence | MKIITTKEFA KATKIDKLGV PGLAALLMEM MKLNDINKVF SQNEHFNGLE FVDKILETIG VSIDFDEDDL KNIPKTGGFI AIANHPYGGV EGLALVKLLC TVRPEAKVMV NFILKKIPNL SEFFVAVNPF ENVQHTSSIS GLKATFDLLQ SGTPIGIFPA GEVSTFSLDK QEITDRLWHP VVGKLIARAK VPVIPIYFHG NNGVLFNILS FIHPTLRTAK LPSEFLNKQG LKIKVRIGKP INIEDISYHK NTNKLLDFLR ARTYALGTGL EEEKKLFNPI NLFKIKKKPE PIIEETDRNL IVNEIEELEG FRVWQEKNYE VYIAPTVAIP NVLREIGRLR EITFREVGEG TNKKIDLDNY DIYYHHLFIW DKELQNIVGA YRIGKGDEIL NTMGRRGFYL SELFKIKEPF YPLLRKGIEL GRSWIRKEYQ QKPLPLFLLW KGILKYLLDN PQYRYMFGPV SISNNFSKFS KSLIVDYITK NHFDYELAHY VKPKNKFKAD LSAIDKDLLI ESSESLKDLD SLISDIENSH IKIPVLLRQY MNLNAKIICF NIDPKFSDCL DGFLVVDMQN IPAEMLEKIG KNF
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