Gene Phep_0834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0834 
Symbol 
ID8251923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp985825 
End bp987576 
Gene Length1752 bp 
Protein Length583 aa 
Translation table11 
GC content40% 
IMG OID644934484 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_003091118 
Protein GI255530746 
COG category[R] General function prediction only 
COG ID[COG3176] Putative hemolysin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.16421 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCA TAACTACCAA AGAGTTTGCA AAAGCCACAA AGATAGATAA ATTAGGTGTA 
CCAGGCTTGG CAGCTCTGCT CATGGAGATG ATGAAATTAA ACGACATCAA CAAAGTTTTT
TCTCAGAATG AACATTTTAA CGGACTTGAA TTTGTCGACA AAATATTAGA AACTATTGGT
GTAAGTATCG ATTTTGATGA AGATGACCTT AAAAATATAC CAAAAACCGG GGGCTTTATA
GCCATTGCCA ACCACCCTTA TGGTGGTGTT GAGGGACTTG CTTTAGTAAA ACTACTTTGT
ACAGTCAGAC CAGAAGCCAA GGTTATGGTC AACTTCATTC TAAAAAAGAT CCCCAATCTA
AGTGAGTTCT TTGTTGCGGT CAATCCCTTC GAAAACGTGC AGCACACTTC CAGCATCAGC
GGGTTAAAAG CAACGTTCGA CCTGTTACAG AGTGGCACAC CCATTGGCAT CTTCCCCGCA
GGCGAAGTTT CTACTTTTAG CCTGGATAAA CAGGAAATTA CCGACAGGTT ATGGCATCCT
GTAGTGGGTA AACTGATTGC CCGGGCAAAA GTGCCTGTAA TACCCATCTA TTTTCATGGC
AACAATGGGG TATTGTTTAA TATATTAAGT TTTATACACC CCACCTTAAG AACAGCAAAA
CTACCTTCTG AATTTTTAAA CAAACAGGGA CTTAAAATAA AGGTCAGAAT TGGCAAACCT
ATAAATATAG AAGACATCTC TTACCATAAA AATACGAATA AGCTGCTCGA TTTTTTACGT
GCGCGTACTT ATGCATTGGG TACCGGACTG GAAGAAGAAA AAAAACTGTT CAACCCCATC
AACCTGTTTA AAATCAAGAA AAAACCAGAG CCTATTATTG AGGAAACAGA CCGTAACTTA
ATTGTTAACG AAATTGAAGA GCTGGAAGGT TTCAGGGTAT GGCAGGAAAA AAATTATGAG
GTATATATTG CACCTACAGT AGCCATACCT AACGTTTTAA GGGAAATTGG CCGCCTCAGG
GAAATCACCT TCAGGGAGGT TGGTGAGGGT ACCAATAAAA AAATAGATCT CGACAATTAC
GATATCTATT ACCACCATTT ATTTATATGG GACAAAGAGC TGCAGAATAT TGTTGGGGCT
TACCGCATTG GTAAAGGAGA TGAGATCCTA AACACCATGG GCAGAAGAGG TTTTTATCTT
TCTGAGCTTT TTAAAATTAA AGAGCCTTTT TATCCCTTGC TAAGAAAAGG CATTGAACTC
GGACGCTCCT GGATCCGTAA AGAATACCAG CAAAAGCCAC TTCCCTTGTT CTTATTGTGG
AAAGGCATTT TAAAGTACCT GCTGGATAAC CCCCAATACC GGTACATGTT CGGGCCGGTT
AGCATCAGCA ACAACTTTTC CAAGTTCTCT AAATCGCTGA TCGTTGATTA TATCACTAAA
AACCACTTTG ATTACGAACT GGCCCATTAC GTAAAACCAA AGAACAAATT TAAGGCCGAC
CTGTCCGCCA TTGATAAGGA CCTGCTGATT GAAAGCAGTG AATCTTTAAA AGATCTTGAC
AGCCTGATCT CTGATATTGA AAACTCTCAC ATCAAAATTC CCGTACTGTT AAGGCAGTAC
ATGAACCTGA ATGCCAAGAT TATTTGCTTC AATATAGACC CTAAGTTTTC CGATTGCCTG
GATGGCTTTC TGGTAGTTGA TATGCAGAAT ATCCCAGCCG AAATGCTGGA GAAGATCGGA
AAGAATTTTT AA
 
Protein sequence
MKIITTKEFA KATKIDKLGV PGLAALLMEM MKLNDINKVF SQNEHFNGLE FVDKILETIG 
VSIDFDEDDL KNIPKTGGFI AIANHPYGGV EGLALVKLLC TVRPEAKVMV NFILKKIPNL
SEFFVAVNPF ENVQHTSSIS GLKATFDLLQ SGTPIGIFPA GEVSTFSLDK QEITDRLWHP
VVGKLIARAK VPVIPIYFHG NNGVLFNILS FIHPTLRTAK LPSEFLNKQG LKIKVRIGKP
INIEDISYHK NTNKLLDFLR ARTYALGTGL EEEKKLFNPI NLFKIKKKPE PIIEETDRNL
IVNEIEELEG FRVWQEKNYE VYIAPTVAIP NVLREIGRLR EITFREVGEG TNKKIDLDNY
DIYYHHLFIW DKELQNIVGA YRIGKGDEIL NTMGRRGFYL SELFKIKEPF YPLLRKGIEL
GRSWIRKEYQ QKPLPLFLLW KGILKYLLDN PQYRYMFGPV SISNNFSKFS KSLIVDYITK
NHFDYELAHY VKPKNKFKAD LSAIDKDLLI ESSESLKDLD SLISDIENSH IKIPVLLRQY
MNLNAKIICF NIDPKFSDCL DGFLVVDMQN IPAEMLEKIG KNF