Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0831 |
Symbol | |
ID | 8251920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 982100 |
End bp | 983599 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 644934481 |
Product | hypothetical protein |
Protein accession | YP_003091115 |
Protein GI | 255530743 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGATT TACATCTAAT TAACAGTTTT GTATATAATA AATTAAAACA TATAAAAATG AAAAAACAGT TACTAGCTTC TATTTTTGGC CTGCTTGTAT TCTTAACAAG CTGCTCAAAA AGCACTGATG ATGATGGAGA TATAAATCCA CCTGCCACGG GTACGGTTGA GGTTTCAGGA GATATTACGA CAAGCACAAC ATGGAGTGCA GATAAAATCT ACCTTTTAAA AGGAAATGTT TTTGTAACCA ATAATGCTAC ATTAACCATT GAGCCAGGGA CAATTATCAA AGGTGATAAA GGTACTAAAG GTGCTTTAAT CATTACCAGA GGCGCTAAAA TTATGGCTGT TGGTACAGTT GAGAAACCAA TTGTATTTAC TTCAAGCATT ACTGCTGGTG CCCGTAAAGA AGGAGATTGG GGCGGTGTAA TTTTATTGGG TAAAGCGCAA AATAATTTGG GTACCTCAGT GCCGATTGAA GGTATTTCTG ATGCAACTGA TAAAGGTAAA CACGGTGGTA CCGATAATAC TGATAATTCG GGTATAATGA AATATGTACG TATAGAATTT GCAGGTATTG CGCTAAGTCC GGATAACGAA ATCAACGGTT TAACTTTTGG GTCTGTTGGG TCTGGTACTA CAATCGATTA TATCGAGGTG TATCGTTCGG GTGATGATGC TTACGAATGG TTCGGTGGTG CCGTTAACTG TTCTCACTTA TTGGCTATCG ACAGCTGGGA TGATGATTTT GATACAGATA ACGGTTTCTC TGGTAAAGTT CAATTCGGGT TAGCACAGCG TTTAGCTGTA ACTGCCGACG TTTCTGGTTC AAACGGTTTT GAATCAGATA ACAATGCCGC TGGTGATAAC GCTACACCAC AAACATCAGC TGTGTTTTCA AATATGACCA TTTTAGGTCC GGTAGCCTCT GGTGGCAGCA GTATTAATGC TAACTTTCAG CATGGCGCTC AAATCCGTCG CAACTCTGCA ATGAGCTTAT TCAACTCAGT AATTGTTGGT TACACAGAAG GTGTGTTTTA TGATGATGGA TTGCCAACTA CACCTGTAGG TGGTGTTCTT TTGAATTCCT CCCTTAACCT TACGGCGGGT AGATCTGTAT TTGCTAACAA CTTAGTTTAT AACAGCAATA GTAAAAACAA TCAGATTAAA GCATCTAATG CAACAGCGCT AGGTGTAATT ACTCCATTGT TAACAGTTGC GAATACATTT GATGCAAGTG CTACAGCAGA GAGTATCTTT ATCAGTCCTT ATAAATATTC TGCAGATTTA GTTGCAGCCG CCAGAGTTGG TACACCAGAT TTTACTGTAA AAACTGGCTC TGCCGCAGCT TCAGGTGCTG CATTTACCAA CGCAAAATTA GCGTCAGGAT TTACATCTGT AGCTTACAGA GGTGCTTTTG GTACTGATAA CTGGGCTGCA GGCTGGGCTC ATTTCGATCC GCAATCTTTA CCTTACACTA CGCCTGGTGC TGTAAAATAA
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Protein sequence | MSDLHLINSF VYNKLKHIKM KKQLLASIFG LLVFLTSCSK STDDDGDINP PATGTVEVSG DITTSTTWSA DKIYLLKGNV FVTNNATLTI EPGTIIKGDK GTKGALIITR GAKIMAVGTV EKPIVFTSSI TAGARKEGDW GGVILLGKAQ NNLGTSVPIE GISDATDKGK HGGTDNTDNS GIMKYVRIEF AGIALSPDNE INGLTFGSVG SGTTIDYIEV YRSGDDAYEW FGGAVNCSHL LAIDSWDDDF DTDNGFSGKV QFGLAQRLAV TADVSGSNGF ESDNNAAGDN ATPQTSAVFS NMTILGPVAS GGSSINANFQ HGAQIRRNSA MSLFNSVIVG YTEGVFYDDG LPTTPVGGVL LNSSLNLTAG RSVFANNLVY NSNSKNNQIK ASNATALGVI TPLLTVANTF DASATAESIF ISPYKYSADL VAAARVGTPD FTVKTGSAAA SGAAFTNAKL ASGFTSVAYR GAFGTDNWAA GWAHFDPQSL PYTTPGAVK
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