Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_0829 |
Symbol | |
ID | 8251918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 978600 |
End bp | 979127 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644934479 |
Product | protein of unknown function DUF962 |
Protein accession | YP_003091113 |
Protein GI | 255530741 |
COG category | [S] Function unknown |
COG ID | [COG4539] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.913113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGG CGAAAAATAA AGGAACGGTT GCTGCAGCAC CTAAAAAGGC TGTGGATGTG CTTTTTGACA AGTATGCAGA AAGTCACCAA AACCCTACCA ATGAATTGAT TCACTGGATT TGTGTTCCGC TAATTGTTTT TAGTCTGCTT GGTTTGGTAT GGGCAATTCC GTTTCCATAT CTTGAGTTTC TGGGTAAGTT TAATGGCTTT CTGAACTGGG CATCATTTCT GATTGCATTT TCCCTGTACT ATTATTTTAC TTTGTCGCCC GTATTGTCTT TTTTGATGCT GTGGGTAATC AGCCTGATGA GTTATCTCAT CGTTCAGCTG GAATATTGGC AGGCCGGTGG AGGCCCTGCG GTCTGGTTAG TTTGTCTGGT GATTTTTGTA CTTGCTTGGA TCGGACAATT TATCGGGCAT AAAATAGAAG GAAAGAAGCC TTCGTTTCTG GAAGATGTTA AGTTCCTGTT AATTGGCCCT ATTTGGTTAT TGCATTTCAT CTGCAAAAAA GCAGGCTTGA GGTATTGA
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Protein sequence | MKKAKNKGTV AAAPKKAVDV LFDKYAESHQ NPTNELIHWI CVPLIVFSLL GLVWAIPFPY LEFLGKFNGF LNWASFLIAF SLYYYFTLSP VLSFLMLWVI SLMSYLIVQL EYWQAGGGPA VWLVCLVIFV LAWIGQFIGH KIEGKKPSFL EDVKFLLIGP IWLLHFICKK AGLRY
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