Gene Phep_0829 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0829 
Symbol 
ID8251918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp978600 
End bp979127 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content41% 
IMG OID644934479 
Productprotein of unknown function DUF962 
Protein accessionYP_003091113 
Protein GI255530741 
COG category[S] Function unknown 
COG ID[COG4539] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.913113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGG CGAAAAATAA AGGAACGGTT GCTGCAGCAC CTAAAAAGGC TGTGGATGTG 
CTTTTTGACA AGTATGCAGA AAGTCACCAA AACCCTACCA ATGAATTGAT TCACTGGATT
TGTGTTCCGC TAATTGTTTT TAGTCTGCTT GGTTTGGTAT GGGCAATTCC GTTTCCATAT
CTTGAGTTTC TGGGTAAGTT TAATGGCTTT CTGAACTGGG CATCATTTCT GATTGCATTT
TCCCTGTACT ATTATTTTAC TTTGTCGCCC GTATTGTCTT TTTTGATGCT GTGGGTAATC
AGCCTGATGA GTTATCTCAT CGTTCAGCTG GAATATTGGC AGGCCGGTGG AGGCCCTGCG
GTCTGGTTAG TTTGTCTGGT GATTTTTGTA CTTGCTTGGA TCGGACAATT TATCGGGCAT
AAAATAGAAG GAAAGAAGCC TTCGTTTCTG GAAGATGTTA AGTTCCTGTT AATTGGCCCT
ATTTGGTTAT TGCATTTCAT CTGCAAAAAA GCAGGCTTGA GGTATTGA
 
Protein sequence
MKKAKNKGTV AAAPKKAVDV LFDKYAESHQ NPTNELIHWI CVPLIVFSLL GLVWAIPFPY 
LEFLGKFNGF LNWASFLIAF SLYYYFTLSP VLSFLMLWVI SLMSYLIVQL EYWQAGGGPA
VWLVCLVIFV LAWIGQFIGH KIEGKKPSFL EDVKFLLIGP IWLLHFICKK AGLRY