| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_0816 |
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| Symbol | |
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| ID | 8251905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 965346 |
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| End bp | 967796 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644934466 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003091100 |
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| Protein GI | 255530728 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAAAAA TCATTACCAA TTGTATAGCC TTGGTCTTAC TTTCTGCAAG TCTGTCCTTT
GCACAAACAG GAAATATCAA AGGTTCCGTA AAAACTTCAG ATGGAAAGCC AGCTGAACTG
GTGACGGTAA ACATTAAAGG CACAGGAAAA ACAGCGTTGA CCGATAAAAG GGGAGCGTAT
CAGCTAAAGG GCATTAAGCC GGGTACATAT AGCTTAATTG CAACATTTAT CGGTTTGTTA
AAACAGGAAC AGACGGTTGA AGTGAGAACC GGTGAAGCAA CAGCAGCCGA CTTTATCCTG
AACGAAAATT CGGATCAGTT GCAAGAAGTG ATCATATCTT CAAGAAATGT AAATAAAGTA
ACAGCTTCGA TAGCAAAAAT GCCTCTAAAA AACCTGGAAA ACCCACAGGT GTATAGTTCT
GTTTCTTCAG AAATATTGAA ACAACAAGCC ATTAGTAACT ATGATGATGC GATGCGGAAC
ATCCCTGGGA TATCGAGAAC GTGGGAATCT ACAGGAAGGG GTGGTGATGG CGCCTCTTAT
TTTGCCTTAC GTGGTTTTGA AGCACAGCCA AGCCTGATCA ATGGGTTGCC GGGCTTAACC
AGCGGTAACC TGGATCCTGC CAGTGTAGAA GATATACAGG TAATGAAAGG CCCTTCAGGT
ACCTTATTTG GCGCAAGCTT TTATGGCTAT GGCGGGATCA TCAATACCAT TACCAAAAAA
CCTTATGATC ACTTTGGTGG GGAAGTGGCC TACAATTTTG GAAGTTTTGG ATTAAACCGG
ATTACGGCAG ACATTAATGC GCCTTTGAGT AAAACGGAAA AAATAGCACT GCGTGTAAAC
ACGGCCTACC ATACAGAAAA TAGTTTCCAG GATGCAGGGT TTAAAAAATC TTTTTACATT
GCGCCGAGTT TAGCTTATGA GGTGAATGAC CGGCTTTCTT TTCATGTTTT TACTGAGATT
TTGCAAGAAG AAAGGGCAGT TGCACCGGTA TTTTTCAACT CCAATAGAGA CACTACACTC
ATTTTTAAAA ACCTGAAGGA GTTGAACCTG AACAGGAACC TCTCTTTTAC CAGTAATGAT
GTTGGGATAA AGAATCCGAG GTATAACCTT CAGGGCCAGA TGCTGTACAA ATTGTCGGAT
CACTGGACCT CACAAACTGT GATTTCCAGA GGAAATGTAA AATCAGATGG CTATTATACC
TATATCTGGG ATGACGCATA TCTGGAGACA GGAGGTGCCA ACAGGGATAA TTATTTTGAC
CAGTATTTCC ACAAAGAACA GCAAACTACC AATACCACAG ACATACAGCA AAATTTTAAT
GCTGATTTTA AGATCGGAAA CCTGAGAAAC CGGCTGTTGA TAGGCCTGGA TTATTACAGC
CGCAATGTGA TTGACAATGG CTCTGGATGG GCAGCTGTAA GACAGATTAC TCCTCAAAGC
AGCGAAGTTG AACTTGATAA AGATGGCCAT GAAATTGACC CGGTATTTTT AACCCAGGCG
GTGGTAGACA AAGCATTGGC AGAGGCCGGG GGTGGAAGCC ACACCAATAT TAAAAACAGT
ATATCTAGTG CTTATGTATC GAACGTGCTT AATTTTACCC CTTCGTTAAG TGTAATGGCT
AGCCTTAGGA TGGATTATTT TGATTCTAAA GGCGATATCA ACAAGCCTAA AGATCCTACA
GATGCTTATC ACCAGTTGAC GCTGTCGCCT AAATTTGGCG TGGTTTTTCA GCCTGTTCTG
GATAAGGTAT CTGTTTTTGC GAATTATATG AACGCATTTT TTAATGTAAA TCCACGTGAA
GTATTTGATG ATAATAAAGT AAGCCAGGGC GTAAGGTCAT TTAAGCCGGA ACAGGCCAAC
CAATGGGAAT TTGGTGTGAA AGCCAATCTG TTTGCTGATA AGTTGTTTGC CACTTTCTCT
GTATATGACA TTAAGGTATC AAACAGGGTT TATGATACGC CCATTACTGC TGTGCAAGGT
GGAAAAACAG GAAGTAAAGG TTTTGATTTT GATTTAAGTG CAAATCCTTT TCCTGGTTTT
AATGTGATTG CAGGAGTTAG CCATTCGAGC ATTAAGGTGC TTAAAGGTAA TACAGGTACG
CCTACAGATT TTTACAACGA GGTGGGCAGA AGTCCGGGCG GACAAGGCCC TCAGGACCTG
GCCAATTTAT GGGCCACCTA TAAATTTGGC TATGGCAAAT TGAAAGACTT TGGTATTGGG
TTAGGCGGAA ACTATGCCGG GGTATATAAA GTAATAGACA ATAGTGTAAC GGGAGTTTTT
GAATTGCCAG GTTATACCCT GATCAATGCC AGTTTATTTT ATAATTCAGA TAAATACAGG
TTTACTTTTA ATATGAACAA CCTGACCAAC GAAGATTACT ATATTGGTTA CTGGTCTGTT
AACCCGCAGA AACCAAGAAA CTTTGCTGCT AGTTTTGCTT ACAAGTTTTA A
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| Protein sequence | MIKIITNCIA LVLLSASLSF AQTGNIKGSV KTSDGKPAEL VTVNIKGTGK TALTDKRGAY
QLKGIKPGTY SLIATFIGLL KQEQTVEVRT GEATAADFIL NENSDQLQEV IISSRNVNKV
TASIAKMPLK NLENPQVYSS VSSEILKQQA ISNYDDAMRN IPGISRTWES TGRGGDGASY
FALRGFEAQP SLINGLPGLT SGNLDPASVE DIQVMKGPSG TLFGASFYGY GGIINTITKK
PYDHFGGEVA YNFGSFGLNR ITADINAPLS KTEKIALRVN TAYHTENSFQ DAGFKKSFYI
APSLAYEVND RLSFHVFTEI LQEERAVAPV FFNSNRDTTL IFKNLKELNL NRNLSFTSND
VGIKNPRYNL QGQMLYKLSD HWTSQTVISR GNVKSDGYYT YIWDDAYLET GGANRDNYFD
QYFHKEQQTT NTTDIQQNFN ADFKIGNLRN RLLIGLDYYS RNVIDNGSGW AAVRQITPQS
SEVELDKDGH EIDPVFLTQA VVDKALAEAG GGSHTNIKNS ISSAYVSNVL NFTPSLSVMA
SLRMDYFDSK GDINKPKDPT DAYHQLTLSP KFGVVFQPVL DKVSVFANYM NAFFNVNPRE
VFDDNKVSQG VRSFKPEQAN QWEFGVKANL FADKLFATFS VYDIKVSNRV YDTPITAVQG
GKTGSKGFDF DLSANPFPGF NVIAGVSHSS IKVLKGNTGT PTDFYNEVGR SPGGQGPQDL
ANLWATYKFG YGKLKDFGIG LGGNYAGVYK VIDNSVTGVF ELPGYTLINA SLFYNSDKYR
FTFNMNNLTN EDYYIGYWSV NPQKPRNFAA SFAYKF
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