Gene Phep_0811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0811 
Symbol 
ID8251900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp959710 
End bp960447 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content40% 
IMG OID644934461 
Producthypothetical protein 
Protein accessionYP_003091095 
Protein GI255530723 
COG category[S] Function unknown 
COG ID[COG3828] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.8275 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC TAGGTATAAC CATTATATTG TGCATCATTT GTGGGACTTG TTTTGCGCAG 
AAAAAGATAC ACATCCTGAT CATTACCGGG GGACATGGAT TTAAGCAGGT ACCGTTTTAC
CAGATGTTTG ATTCATTAGG TAGTCATATT AGTTACGATA AACTGGAACA ACCGGCAGCC
AATGCACTGA TCGCCTCAGC AGCTGTCGAC AAATATGATG CACTTGTTTT TTATGATATG
TACAATTCTA TTACTGCATC ACAAAAACAG GCTTATCAGC AATTGTTAAA GAAAGGAAAG
GCAATGCTAT TTCTGCACCA TTCTTTGGTA TCTTACCAGG ATTGGGATGA ATTTCAAAAG
ATCATTGGGG GTAAATATTA TGAGCAGGCA ACACTTGTAA ATGGTGATAC CATAAAATCG
AGCTACCAGC ACGATGTCAT TATCCCGGTG AAAATAGAAA GCCCTAAGCA CCCTGTTACC
AGAGGGCTTA AAGATTTCGA AATCTACGAT GAAGTATATG GGCATTTTGG TACGCAGCCA
AATATCAGGC CATTGCTTAG TACCACTCAT CCGGGGAGTT CCCGTTACAT CGCATGGATC
AATACTTATG GTCGCACTGA TGTCCTGTTT ATCCAATTGG GACATGGACC GGAAGCCTTC
AAGAATCCCA ATTACAGGAA ATTGTTAAAG CAGGGTATTG AATGGTCGGT ATTGCGGCAT
AAAAAAAATA TGGATTAA
 
Protein sequence
MKKLGITIIL CIICGTCFAQ KKIHILIITG GHGFKQVPFY QMFDSLGSHI SYDKLEQPAA 
NALIASAAVD KYDALVFYDM YNSITASQKQ AYQQLLKKGK AMLFLHHSLV SYQDWDEFQK
IIGGKYYEQA TLVNGDTIKS SYQHDVIIPV KIESPKHPVT RGLKDFEIYD EVYGHFGTQP
NIRPLLSTTH PGSSRYIAWI NTYGRTDVLF IQLGHGPEAF KNPNYRKLLK QGIEWSVLRH
KKNMD