Gene Phep_0808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_0808 
Symbol 
ID8251897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp956201 
End bp957223 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content45% 
IMG OID644934458 
Productrod shape-determining protein MreB 
Protein accessionYP_003091092 
Protein GI255530720 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.880258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTTTAT TTAATTGGTT TACACAAGAG GTTGCTATCG ATTTAGGCAC GGCAAACACC 
TTGATTATAC ATAATGACAA AGTAGTAGTT GATGAACCTT CAATAGTTGC TTTTGACAGA
CAGACAAATA AAATTATTGC AATTGGCCGG CAGGCCATGC AGATGGAAGG TAAGACCCAT
GATAATATCC GTACCGTCCG TCCGCTTAAA GATGGCGTGA TAGCAGATTT CAATGCTGCT
GAAGCCATGA TCAAAGGAAT GATCAGGATG CTAAACGGTG GTAAAGGCTG GATGTTCCCT
TCGCTGAGAA TGGTAATCTG TATCCCTTCA GGAATTACAG AAGTTGAAAA GCGCGCGGTA
AGGGACTCGG CAGAGATTGC CGGTGCCAAA GAGGTTTACC TGATCCATGA GCCTATGGCT
GCTGCAGTAG GCATAGGGAT TGATGTAGAA GAACCAATGG GAAACATGAT CATCGATATA
GGTGGTGGTA CTACTGAAAT AGCAGTTATC GCCTTATCGG GTATTGTGTG CGACCAGAGT
ATCCGCGTTG CGGGTGACAA TTTCGACTCC GATATTGTAA ATTACATCCG TCGCCAGCAC
AACATCATGA TTGGCGACCG GACTGCCGAA AAAATTAAAA TAGAGGTTGG TGCTGCATTG
CCTGAACTGG CAGATCCACC GGCAGATTTT GCCGTTCAAG GTCGTGACCT GATGACTGGT
GTGCCTAAGC AGATTACCGT TTCCTATACC GAAATAGCAC ATTGCCTGGA TAAATCAATC
TCTAAAATTG AAGAAGCTAT CCTTAAAGCC TTAGAGATCA CGCCACCCGA GCTTTCTGCT
GATATTTATC AGACAGGTAT TTACCTGACA GGTGGTGGAG CATTGCTGCG TGGTTTAGAT
AAACGTGTAG CGGCTAAAAC CAAACTGCCC GTACACGTTG CCGAAGATCC GCTTCGTGCC
GTGGTACGCG GAACAGGTAT AGCTTTAAAA AACATTGGCG GTTTTAAATT TTTAATGCAG
TAA
 
Protein sequence
MGLFNWFTQE VAIDLGTANT LIIHNDKVVV DEPSIVAFDR QTNKIIAIGR QAMQMEGKTH 
DNIRTVRPLK DGVIADFNAA EAMIKGMIRM LNGGKGWMFP SLRMVICIPS GITEVEKRAV
RDSAEIAGAK EVYLIHEPMA AAVGIGIDVE EPMGNMIIDI GGGTTEIAVI ALSGIVCDQS
IRVAGDNFDS DIVNYIRRQH NIMIGDRTAE KIKIEVGAAL PELADPPADF AVQGRDLMTG
VPKQITVSYT EIAHCLDKSI SKIEEAILKA LEITPPELSA DIYQTGIYLT GGGALLRGLD
KRVAAKTKLP VHVAEDPLRA VVRGTGIALK NIGGFKFLMQ